RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 J3QLW9 94 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 NDUFB5O43674 189 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 TIAF1O95411 115 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 PDGFBP01127 241 aaPredicted RBP18.33■□□□□ 0.53
USP39-204ENST00000409766 ZNF19P17023 458 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 AQP2P41181 271 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.33■□□□□ 0.536e-7■□□□□ 9.1
USP39-204ENST00000409766 ZMAT1Q5H9K5 638 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 DDI2Q5TDH0 399 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 NUP54Q7Z3B4 507 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 RFLNBQ8N5W9 214 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 C10orf53Q8N6V4 93 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 FAM181AQ8N9Y4 354 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 LRRC75AQ8NAA5 344 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 ZPLD1Q8TCW7 415 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 ZNRF4Q8WWF5 429 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 KCNN2Q9H2S1 579 aa18.33■□□□□ 0.53
USP39-204ENST00000409766 IGHV5-10-1A0A0J9YXX1 117 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 IMPA2O14732 288 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 EIF4E2O60573 245 aaKnown RBP18.33■□□□□ 0.52
USP39-204ENST00000409766 OR2T7P0C7T2 308 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 CAPZA2P47755 286 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 DIO1P49895 249 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 HCCSP53701 268 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 TAS2R43P59537 309 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 E2F1Q01094 437 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 PON3Q15166 354 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 GLYR1Q49A26 553 aaPredicted RBP18.33■□□□□ 0.52
USP39-204ENST00000409766 FAM122BQ7Z309 247 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 CADM3Q8N126 398 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 OR2T27Q8NH04 317 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 HTRA1Q92743 480 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 KTI12Q96EK9 354 aaPredicted RBP18.33■□□□□ 0.52
USP39-204ENST00000409766 CNN2Q99439 309 aaKnown RBP18.33■□□□□ 0.52
USP39-204ENST00000409766 TBL1XR1Q9BZK7 514 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 SRRQ9GZT4 340 aa18.33■□□□□ 0.52
USP39-204ENST00000409766 IGHV3-20A0A0C4DH32 117 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 BOLA2-SMG1P6H3BVE0 249 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 SPI1P17947 270 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 UQCRC1P31930 480 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 LGALS3BPQ08380 585 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 TOMM34Q15785 309 aaPredicted RBP18.32■□□□□ 0.52
USP39-204ENST00000409766 NKAIN1Q4KMZ8 207 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 LCN1P1Q5VSP4 162 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 ARL9Q6T311 187 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 PRMT8Q9NR22 394 aaPredicted RBP18.32■□□□□ 0.52
USP39-204ENST00000409766 PCNX3Q9H6A9 2034 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 VPS13AQ96RL7 3174 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 TEX13CA0A0J9YWL9 993 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 AGRPO00253 132 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 GMFGO60234 142 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 CD14P08571 375 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 APEHP13798 732 aaKnown RBP18.32■□□□□ 0.52
USP39-204ENST00000409766 F8A1P23610 371 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 DEFA1P59665 94 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 DEFA3P59666 94 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 KRR1Q13601 381 aaKnown RBP18.32■□□□□ 0.52
USP39-204ENST00000409766 SLC35D3Q5M8T2 416 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 PWWP2BQ6NUJ5 590 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 OR8H2Q8N162 312 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 GHDCQ8N2G8 530 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 NLGN4YQ8NFZ3 816 aaPredicted RBP18.32■□□□□ 0.52
USP39-204ENST00000409766 OR5J2Q8NH18 312 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 PIGKQ92643 395 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 Q96M85 177 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 LPAR4Q99677 370 aa18.32■□□□□ 0.52
USP39-204ENST00000409766 WDR87Q6ZQQ6 2873 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 FADS1O60427 444 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 NCR1O76036 304 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 ITPKBP27987 946 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 CDKN2AP42771 156 aaKnown RBP18.31■□□□□ 0.52
USP39-204ENST00000409766 RNF4P78317 190 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 TRAM1Q15629 374 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 ALG10Q5BKT4 473 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 DMKNQ6E0U4 476 aaPredicted RBP18.31■□□□□ 0.52
USP39-204ENST00000409766 RPTNQ6XPR3 784 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 TAAR8Q969N4 342 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 DIRAS2Q96HU8 199 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 PGLYRP3Q96LB9 341 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 DEPDC7Q96QD5 511 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 ATF6BQ99941 703 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 MESP1Q9BRJ9 268 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 SEMA4CQ9C0C4 833 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 RNF32Q9H0A6 362 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 ADAMTS9Q9P2N4 1935 aa18.31■□□□□ 0.52
USP39-204ENST00000409766 IDSB3KWA1 339 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 SCRG1O75711 98 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 SPNP16150 400 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 PYCR1P32322 319 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 NAA10P41227 235 aaPredicted RBP18.3■□□□□ 0.52
USP39-204ENST00000409766 MTNR1BP49286 362 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 IL10RAQ13651 578 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 GDPD3Q7L5L3 318 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 ANKRD37Q7Z713 158 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 SLC35F2Q8IXU6 374 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 SYS1Q8N2H4 156 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 APCDD1LQ8NCL9 501 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 EDAQ92838 391 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 PPIL3Q9H2H8 161 aaKnown RBP18.3■□□□□ 0.52
USP39-204ENST00000409766 TBC1D24Q9ULP9 559 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms