RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ZNF544Q6NX49 715 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 TMEM19Q96HH6 336 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 SPATA9Q9BWV2 254 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 FKRPQ9H9S5 495 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 SLC17A5Q9NRA2 495 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 SLC7A10Q9NS82 523 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 CADP27708 2225 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 E7EQL1 145 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 BMP4P12644 408 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 ACAA2P42765 397 aaKnown RBP12.94□□□□□ -0.34
CBX3-203ENST00000409747 NUDT6P53370 316 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 STX1BP61266 288 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 TSPO2Q5TGU0 170 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 TMEM225Q6GV28 225 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 DNM1P46Q6ZS02 220 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 AAED1Q7RTV5 226 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 MAVSQ7Z434 540 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 GPAT4Q86UL3 456 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 MUC15Q8N387 334 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 SLC35B4Q969S0 331 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 TLCD1Q96CP7 247 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 OR52B2Q96RD2 323 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 RHNO1Q9BSD3 238 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 CACNG6Q9BXT2 260 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 OBP2BQ9NPH6 170 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 B3GALT5Q9Y2C3 310 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 CSPG4Q6UVK1 2322 aa12.94□□□□□ -0.34
CBX3-203ENST00000409747 A0A1W2PR80 420 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 OR6C65A6NJZ3 312 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 KRT33AO76009 404 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 AKR7A3O95154 331 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 PAX7P23759 505 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 FABP6P51161 128 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 FOXG1P55316 489 aaPredicted RBP12.93□□□□□ -0.34
CBX3-203ENST00000409747 DSCR9P59020 149 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 PRPS1P60891 318 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 SPOCK1Q08629 439 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 FADDQ13158 208 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 C9orf135Q5VTT2 229 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 PRIMA1Q86XR5 153 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 TMEM99Q8N816 258 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 AURKBQ96GD4 344 aaPredicted RBP12.93□□□□□ -0.34
CBX3-203ENST00000409747 TMBIM4Q9HC24 238 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 A4GALTQ9NPC4 353 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 ADPRHL2Q9NX46 363 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 GDF2Q9UK05 429 aaPredicted RBP12.93□□□□□ -0.34
CBX3-203ENST00000409747 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 JMJD1CQ15652 2540 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 FRS3O43559 492 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 TLX2O43763 284 aaPredicted RBP12.93□□□□□ -0.34
CBX3-203ENST00000409747 SSX4O60224 188 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 NDUFS7O75251 213 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 CRLF1O75462 422 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 KRTAP1-1Q07627 177 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 GTDC1Q4AE62 458 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 ZNF311Q5JNZ3 666 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 RPS26P11Q5JNZ5 115 aaPredicted RBP12.93□□□□□ -0.34
CBX3-203ENST00000409747 C1orf140Q5VVS0 124 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 C11orf71Q6IPW1 123 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 CLEC2AQ6UVW9 174 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 GOLGA6L1Q8N7Z2 621 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 WDR31Q8NA23 367 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 MAPK1IP1LQ8NDC0 245 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 OR9I1Q8NGQ6 314 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 BBS10Q8TAM1 723 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 STK35Q8TDR2 534 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 VPS33AQ96AX1 596 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 BOD1Q96IK1 185 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 BCL2L10Q9HD36 194 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 RASD1Q9Y272 281 aa12.93□□□□□ -0.34
CBX3-203ENST00000409747 C5orf58C9J3I9 102 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 POLR3GO15318 223 aaPredicted RBP12.92□□□□□ -0.34
CBX3-203ENST00000409747 AHSA1O95433 338 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 GTF2E2P29084 291 aaKnown RBP12.92□□□□□ -0.34
CBX3-203ENST00000409747 MRPL19P49406 292 aaKnown RBP12.92□□□□□ -0.34
CBX3-203ENST00000409747 CHRNB3Q05901 458 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 RAB35Q15286 201 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 RGNQ15493 299 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 SERPINA11Q86U17 422 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 CLIP4Q8N3C7 705 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 ZIC4Q8N9L1 334 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 GTF2H4Q92759 462 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 C3orf49Q96BT1 292 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 ZNF385AQ96PM9 386 aaKnown RBP12.92□□□□□ -0.34
CBX3-203ENST00000409747 C1QTNF6Q9BXI9 259 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 MOV10Q9HCE1 1003 aaKnown RBP12.92□□□□□ -0.34
CBX3-203ENST00000409747 PCDHB14Q9Y5E9 798 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 ATP23Q9Y6H3 246 aa12.92□□□□□ -0.34
CBX3-203ENST00000409747 TMEM229AB2RXF0 380 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 ZNF587BE7ETH6 402 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 H7C417 338 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 CLIC1O00299 241 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 CD5LO43866 347 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 TGDSO95455 350 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 BMP2P12643 396 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 IRX1P78414 480 aaPredicted RBP12.91□□□□□ -0.34
CBX3-203ENST00000409747 BNIP2Q12982 314 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 EPGNQ6UW88 154 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 B3GLCTQ6Y288 498 aa12.91□□□□□ -0.34
CBX3-203ENST00000409747 MFSD8Q8NHS3 518 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms