RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 IGKV1D-16P01601 117 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 HOXB2P14652 356 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 PVRP15151 417 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SPI1P17947 270 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 M6PRP20645 277 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 RPL4P36578 427 aaKnown RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 LSSP48449 732 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 EPHA4P54764 986 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 YPEL5P62699 121 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 MRPS10P82664 201 aaKnown RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 RPL6Q02878 288 aaKnown RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 ELFN2Q5R3F8 820 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SLC6A19Q695T7 634 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SIGIRRQ6IA17 410 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 FAM199XQ6PEV8 388 aaPredicted RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 KIRREL2Q6UWL6 708 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 PRSS45Q7RTY3 260 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SLC35F3Q8IY50 421 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 OR8H3Q8N146 312 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 OR51L1Q8NGJ5 315 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 C15orf40Q8WUR7 153 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 DACT3Q96B18 629 aaPredicted RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 ARSGQ96EG1 525 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 CCDC3Q9BQI4 270 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SLC19A3Q9BZV2 496 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 NANSQ9NR45 359 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 COPS3Q9UNS2 423 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 CA5BQ9Y2D0 317 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 COL4A2P08572 1712 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 NPIPB9F8W1W9 429 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 GLCEO94923 617 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 CA3P07451 260 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 RAB40ALP0C0E4 278 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 PSMB1P20618 241 aaKnown RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 COL9A1P20849 921 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 METTL11BQ5VVY1 283 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 ZC3H14Q6PJT7 736 aaKnown RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 PARM1Q6UWI2 310 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 DGAT2L6Q6ZPD8 337 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 LINGO2Q7L985 606 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 KCTD20Q7Z5Y7 419 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SHISA5Q8N114 240 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 PIAS4Q8N2W9 510 aaPredicted RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 BMPERQ8N8U9 685 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 FAM71CQ8NEG0 241 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 RAB40AQ8WXH6 277 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 HSPA12BQ96MM6 686 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 VSTM2LQ96N03 204 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 GPX7Q96SL4 187 aaPredicted RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SPRTNQ9H040 489 aaPredicted RBP9.84□□□□□ -0.83
CLIP4-204ENST00000404424 AUNIPQ9H7T9 357 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 HRASLSQ9HDD0 168 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 Q9N2J8 555 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 HRASLS2Q9NWW9 162 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 KLHL9Q9P2J3 617 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 SCN2AQ99250 2005 aa9.84□□□□□ -0.83
CLIP4-204ENST00000404424 OR7A10O76100 309 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 IGF2P01344 180 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 POU3F3P20264 500 aaPredicted RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 DPP4P27487 766 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 VSX2P58304 361 aaPredicted RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 SNTA1Q13424 505 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 ALG11Q2TAA5 492 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 LGALSLQ3ZCW2 172 aaPredicted RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 OR4N2Q8NGD1 307 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 FGF14Q92915 247 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 RIT1Q92963 219 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 RBM18Q96H35 190 aaKnown RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 DERL3Q96Q80 235 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 NMNAT3Q96T66 252 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 ORAI3Q9BRQ5 295 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 ZNF436Q9C0F3 470 aaPredicted RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 CPNE7Q9UBL6 633 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 EIF3KQ9UBQ5 218 aaKnown RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 TMA7Q9Y2S6 64 aaKnown RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 ADAM18Q9Y3Q7 739 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 V9GY05 133 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 TEX51A0A1B0GUA7 166 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 BLACEA4D250 179 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 OR5K4A6NMS3 321 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 PIN1P1O15428 100 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 SELENOFO60613 162 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 ICMTO60725 284 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 RDH16O75452 317 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 KRT33AO76009 404 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 TPPPO94811 219 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 IFNA16P05015 189 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 TACSTD2P09758 323 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 CALCBP10092 127 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 PSMB10P40306 273 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 RPS4XP62701 263 aaKnown RBP9.83□□□□□ -0.84
CLIP4-204ENST00000404424 SEZ6L2Q6UXD5 910 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 RFPL4BQ6ZWI9 263 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 OOSP2Q86WS3 158 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 ZNF440Q8IYI8 595 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 OR6V1Q8N148 313 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 BEST4Q8NFU0 473 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 OR11G2Q8NGC1 345 aa9.83□□□□□ -0.84
CLIP4-204ENST00000404424 OR6K6Q8NGW6 343 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms