RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CHRNB1P11230 501 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 BCKDHAP12694 445 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 FAHP16930 419 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TEAD1P28347 426 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 FMO3P31513 532 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRKAG1P54619 331 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TXNL4AP83876 142 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 C3orf33Q6P1S2 294 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 C8orf82Q6P1X6 216 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF621Q6ZSS3 439 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 SYT9Q86SS6 491 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR4K1Q8NGD4 311 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR5AK3PQ8NH89 298 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 MRPS31Q92665 395 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 IL17FQ96PD4 163 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ST6GALNAC5Q9BVH7 336 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 LRTM1Q9HBL6 345 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ATP13A2Q9NQ11 1180 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 INIPQ9NRY2 104 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 HSFX1Q9UBD0 423 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ABCD2Q9UBJ2 740 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 PDE10AQ9Y233 779 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR51B4Q9Y5P0 310 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 CACNA1IQ9P0X4 2223 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TCRBV5S2A0A599 114 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMEM129A0AVI4 362 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMEM82A0PJX8 343 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRR33A8MZF0 331 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 KPNA3O00505 521 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 YY2O15391 372 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 NME2P1O60361 137 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRAF2O60831 178 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TRMUO75648 421 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 STK16O75716 305 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ETHE1O95571 254 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ACRV1P26436 265 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 PSMB5P28074 263 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 BDKRB2P30411 391 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ART1P52961 327 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 MICBQ29980 383 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 CYBRD1Q53TN4 286 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 LY6G5CQ5SRR4 150 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 GPRC6AQ5T6X5 926 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMEM215Q68D42 235 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 CES5AQ6NT32 575 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 LINC00518Q8N0U6 118 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 DHRSXQ8N5I4 330 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 KLK6Q92876 244 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 RPL3LQ92901 407 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 LHX4Q969G2 390 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 C12orf43Q96C57 262 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 CENPNQ96H22 339 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 SENP5Q96HI0 755 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 RIOK2Q9BVS4 552 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 RBM24Q9BX46 236 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 MRPS26Q9BYN8 205 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 RBM38Q9H0Z9 239 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ASCL3Q9NQ33 180 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 POT1Q9NUX5 634 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 SH2B3Q9UQQ2 575 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 URGCP-MRPS24S4R325 110 aa5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 ASCC3Q8N3C0 2202 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-202ENST00000399438 MUC3AQ02505 3323 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRSS44E7EML9 344 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MANBAO00462 879 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MID1O15344 667 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 RS1O15537 224 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 SNAI2O43623 268 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CST4P01036 141 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 SRFP11831 508 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 AMD1P17707 334 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MSH3P20585 1137 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 DPP4P27487 766 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MAP2K4P45985 399 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 PPP3CCP48454 512 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MRPL19P49406 292 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MMP15P51511 669 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MLF1P58340 268 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 WDR5P61964 334 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ELAVL2Q12926 359 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 APOFQ13790 326 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 GPR141Q7Z602 305 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 HCAR2Q8TDS4 363 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 GTF3AQ92664 365 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ROPN1LQ96C74 230 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF578Q96N58 590 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 PPP1R2P1Q96PQ5 205 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF382Q96SR6 550 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 COPS8Q99627 209 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MACROD1Q9BQ69 325 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 Q9N2J8 555 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ABCG2Q9UNQ0 655 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 GRIP1Q9Y3R0 1128 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 TBL2Q9Y4P3 447 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NEUROG3Q9Y4Z2 214 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 LRP12Q9Y561 859 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 KPTNQ9Y664 436 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CKAP5Q14008 2032 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 A0A087X0K7 114 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms