RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 A6NNC1 897 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 NME4O00746 187 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 CASKO14936 926 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 TPST2O60704 377 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 PSME3P61289 254 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 BNIP2Q12982 314 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 SLC17A1Q14916 467 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 OR7A5Q15622 319 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 SPATS1Q496A3 300 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 ENTPD8Q5MY95 495 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 OTUD3Q5T2D3 398 aaPredicted RBP12.68□□□□□ -0.38
HDDC2-202ENST00000398153 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 LINC00114Q6XXX2 140 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 Q6ZT83 130 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 NUFIP2Q7Z417 695 aaKnown RBP12.68□□□□□ -0.38
HDDC2-202ENST00000398153 GABRG1Q8N1C3 465 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 SLC19A3Q9BZV2 496 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 C12orf49Q9H741 205 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 ADPRHL2Q9NX46 363 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 RASD1Q9Y272 281 aa12.68□□□□□ -0.38
HDDC2-202ENST00000398153 NOSIPQ9Y314 301 aaKnown RBP12.68□□□□□ -0.38
HDDC2-202ENST00000398153 TRAPPC13A5PLN9 417 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 CYSRT1A8MQ03 144 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 FTCDNL1E5RQL4 147 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 M0R3H8 397 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 MRPL33O75394 65 aaKnown RBP12.67□□□□□ -0.38
HDDC2-202ENST00000398153 CTAG2O75638 210 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 THRBP10828 461 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 GTF2E2P29084 291 aaKnown RBP12.67□□□□□ -0.38
HDDC2-202ENST00000398153 CDH12P55289 794 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 KRT72Q14CN4 511 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 POU4F3Q15319 338 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 CYBRD1Q53TN4 286 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 STAC2Q6ZMT1 411 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 CCDC103Q8IW40 242 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 CCDC197Q8NCU1 140 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 ADPRHL1Q8NDY3 354 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 STEAP2Q8NFT2 490 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 LINC01560Q8TB33 94 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 ADAMTS16Q8TE57 1224 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 TMEM45BQ96B21 275 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 ZNF300Q96RE9 604 aaPredicted RBP12.67□□□□□ -0.38
HDDC2-202ENST00000398153 WFDC6Q9BQY6 131 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 PTDSS2Q9BVG9 487 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 B3GALT5Q9Y2C3 310 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 SH3GLB1Q9Y371 365 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 TESMINQ9Y4I5 508 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 CORINQ9Y5Q5 1042 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 FLVCR1Q9Y5Y0 555 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 FBN2P35556 2912 aa12.67□□□□□ -0.38
HDDC2-202ENST00000398153 MPDZO75970 2070 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 LOC102725191A0A1B0GVB3 256 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 OR6C65A6NJZ3 312 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 CXCR6O00574 342 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 GSTA4O15217 222 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 GMNNO75496 209 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 AKR7A3O95154 331 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 IFNA8P32881 189 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 RPS5P46782 204 aaKnown RBP12.66□□□□□ -0.38
HDDC2-202ENST00000398153 GSK3BP49841 420 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 ITGADQ13349 1161 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 NPTX1Q15818 432 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 EXOC3L2Q2M3D2 409 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 LRRC23Q53EV4 343 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-202ENST00000398153 SFRP5Q5T4F7 317 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 C1QTNF12Q5T7M4 302 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 FBXW9Q5XUX1 488 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 PGAM4Q8N0Y7 254 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 TMEM99Q8N816 258 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 SCAIQ8N9R8 606 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 APH1AQ96BI3 265 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 KTI12Q96EK9 354 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-202ENST00000398153 LURAP1Q96LR2 239 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 WFIKKN1Q96NZ8 548 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 KCTD14Q9BQ13 255 aaPredicted RBP12.66□□□□□ -0.38
HDDC2-202ENST00000398153 MED18Q9BUE0 208 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 PRR14Q9BWN1 585 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 KLHL4Q9C0H6 718 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 USP22Q9UPT9 525 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 MAST4O15021 2626 aa12.66□□□□□ -0.38
HDDC2-202ENST00000398153 LRBAP50851 2863 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 IGKV1D-42A0A075B6H8 117 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 HTR3EA5X5Y0 456 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 CPSF4LA6NMK7 179 aaKnown RBP12.65□□□□□ -0.38
HDDC2-202ENST00000398153 ZNF814B7Z6K7 855 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 OR5F1O95221 314 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 IGF2P01344 180 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 KLK2P20151 261 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 CCKARP32238 428 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 P2RY4P51582 365 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 SNTB1Q13884 538 aaKnown RBP12.65□□□□□ -0.38
HDDC2-202ENST00000398153 TTC33Q6PID6 262 aaPredicted RBP12.65□□□□□ -0.38
HDDC2-202ENST00000398153 C16orf89Q6UX73 402 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 CBLL1Q75N03 491 aa12.65□□□□□ -0.38
HDDC2-202ENST00000398153 H1FNTQ75WM6 255 aaPredicted RBP12.65□□□□□ -0.38
HDDC2-202ENST00000398153 P2RY8Q86VZ1 359 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms