RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 LINC00615Q96LM1 132 aaPredicted RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CNN2Q99439 309 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 EGFL8Q99944 293 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PAAF1Q9BRP4 392 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 LGR4Q9BXB1 951 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ACTRT3Q9BYD9 372 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 COMMD4Q9H0A8 199 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 EPHX3Q9H6B9 360 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 MAGIXQ9H6Y5 334 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 C1orf109Q9NX04 203 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 MSRAQ9UJ68 235 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 KCNK6Q9Y257 313 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 FNDC3AQ9Y2H6 1198 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 MYLKQ15746 1914 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 YLPM1P49750 1951 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 IGLV3-10A0A075B6K4 115 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CIB4A0PJX0 185 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 THBS1P07996 1170 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CD6P30203 668 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SOAT1P35610 550 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CD200P41217 278 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CRYBA4P53673 196 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 MVKQ03426 396 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 CD47Q08722 323 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF239Q16600 458 aaKnown RBP6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 MICAQ29983 383 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 FIGNL1Q6PIW4 674 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM220Q6QAJ8 160 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SYT13Q7L8C5 426 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM144Q7Z5S9 345 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 P2RY8Q86VZ1 359 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 WDFY1Q8IWB7 410 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ZZZ3Q8IYH5 903 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 DEFB123Q8N688 67 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 OR4M1Q8NGD0 313 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SMPDL3BQ92485 455 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 KCNJ9Q92806 393 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TADA1Q96BN2 335 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 RAB3CQ96E17 227 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 PHB2Q99623 299 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 ANKHQ9HCJ1 492 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 OR2S2Q9NQN1 319 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 LRIT1Q9P2V4 623 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SEC14L4Q9UDX3 406 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 KLHL21Q9UJP4 597 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 SCP2D1Q9UJQ7 156 aa6.09□□□□□ -1.43
TM9SF4-202ENST00000398022 TRBV7-9A0A0J9YWB2 115 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 OOEPA6NGQ2 149 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 SPRY1O43609 319 aaPredicted RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 IFNA5P01569 189 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 TCRBP04435 133 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 PSMB9P28065 219 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 AKT2P31751 481 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 CEACAM8P31997 349 aaPredicted RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF140P52738 457 aaPredicted RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ARPP19P56211 112 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 RAB5BP61020 215 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 GTF2H2Q13888 395 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ATP6V1FQ16864 119 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 GTF2H2CQ6P1K8 395 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ATRAIDQ6UW56 229 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ABHD13Q7L211 337 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 RANBP3LQ86VV4 465 aaPredicted RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 NLGN4XQ8N0W4 816 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 DCBLD1Q8N8Z6 715 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 SIDT2Q8NBJ9 832 aaKnown RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 OR2T11Q8NH01 316 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC22A17Q8WUG5 538 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 AMDHD1Q96NU7 426 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 PIGQQ9BRB3 760 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 NICN1Q9BSH3 213 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 KATNB1Q9BVA0 655 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 MRTO4Q9UKD2 239 aaKnown RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 Q9Y3F1 56 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 MKRN2OSH3BPM6 223 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 TP53I11O14683 189 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 GRM6O15303 877 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 CD5P06127 495 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC6A1P30531 599 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ARR3P36575 388 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ACVRL1P37023 503 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 VIPR2P41587 438 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ERVPABLB-1P60509 514 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 TIAL1Q01085 375 aaKnown RBP eCLIP6.08□□□□□ -1.441e-6■■□□□ 12.8
TM9SF4-202ENST00000398022 ZXDCQ2QGD7 858 aaPredicted RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 FAM174BQ3ZCQ3 159 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 GRINAQ7Z429 371 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 PGBD5Q8N414 524 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 EIF4E3Q8N5X7 224 aaKnown RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 FADS6Q8N9I5 356 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 UXS1Q8NBZ7 420 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 TTC16Q8NEE8 873 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ESAMQ96AP7 390 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 AKR1E2Q96JD6 320 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 PKMYT1Q99640 499 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 TRMT61BQ9BVS5 477 aaKnown RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC32A1Q9H598 525 aa6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF552Q9H707 407 aaPredicted RBP6.08□□□□□ -1.44
TM9SF4-202ENST00000398022 USP22Q9UPT9 525 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms