RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 MAGEB1P43366 347 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 SOX9P48436 509 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 TPMTP51580 245 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 LCN6P62502 163 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 MRPS10P82664 201 aaKnown RBP10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 IRF4Q15306 451 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 GSG1Q2KHT4 349 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 LGALSLQ3ZCW2 172 aaPredicted RBP10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 TMEM205Q6UW68 189 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 PRSS42Q7Z5A4 293 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 PEG10Q86TG7 708 aaKnown RBP10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 GLB1L2Q8IW92 636 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 RELL2Q8NC24 303 aaPredicted RBP10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 OR6M1Q8NGM8 313 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 OR2A1Q8NGT9 310 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 YIPF5Q969M3 257 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 SLC6A7Q99884 636 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 WASH6PQ9NQA3 447 aa10.27□□□□□ -0.76
CSGALNACT1-202ENST00000397998 PSME4Q14997 1843 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF705EA8MWA4 302 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 GABARAPH6UMI1 98 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF432O94892 652 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 F13BP05160 661 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 TFPIP10646 304 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 GUCA1AP43080 201 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 RBMS2Q15434 407 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SWI5Q1ZZU3 235 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 GFOD2Q3B7J2 385 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ARHGAP40Q5TG30 622 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 GLT8D1Q68CQ7 371 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 LRFN4Q6PJG9 635 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF584Q8IVC4 421 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 FBXL6Q8N531 539 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 OR10K1Q8NGX5 313 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 OR2L8Q8NGY9 312 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 TMEM106AQ96A25 262 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SPACA7Q96KW9 195 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SERINC2Q96SA4 455 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 HCAR1Q9BXC0 346 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 MTIF3Q9H2K0 278 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 C6orf106Q9H6K1 298 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 PRSS16Q9NQE7 514 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 PNO1Q9NRX1 252 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 GLS2Q9UI32 602 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SF3B6Q9Y3B4 125 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SIRT4Q9Y6E7 314 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SHISA3A0PJX4 238 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SCDO00767 359 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 EGFP01133 1207 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 AKAIN1P0CW23 69 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 HIST1H1CP16403 213 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ITGA3P26006 1051 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 CD34P28906 385 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 AQP2P41181 271 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 MMP15P51511 669 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ERVFC1P60507 584 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 RAB11BQ15907 218 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 PLA1AQ53H76 456 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 TMUB2Q71RG4 321 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF101Q8IZC7 436 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 OR52R1Q8NGF1 315 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 OR51D1Q8NGF3 324 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SMIM4Q8WVI0 70 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 S100A13Q99584 98 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SLC17A9Q9BYT1 436 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF350Q9GZX5 532 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 MBNL1Q9NR56 388 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 NCDNQ9UBB6 729 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 MAFFQ9ULX9 164 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 GREB1Q4ZG55 1949 aa10.27□□□□□ -0.77
CSGALNACT1-202ENST00000397998 MEIKINA0A087WXM9 373 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 A0A0A6YYD5 115 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 METTL21EPA6NDL7 271 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 PRAMEF2O60811 474 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SEMA7AO75326 666 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SELENOPP49908 381 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 MAP2K6P52564 334 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 AGFG1P52594 562 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SEC61A1P61619 476 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 RPS21P63220 83 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 TNFRSF17Q02223 184 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 AIMP2Q13155 320 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 DYRK1AQ13627 763 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 PRAMEF8Q5VWM4 474 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 PRAMEF7Q5VXH5 474 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF776Q68DI1 518 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 SLC35F3Q8IY50 421 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 C12orf45Q8N5I9 185 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 CSNK1A1LQ8N752 337 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ZNF615Q8N8J6 731 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 GPR148Q8TDV2 347 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 RASD2Q96D21 266 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 ERVMER34-1Q9H9K5 563 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 POMT2Q9UKY4 750 aa10.26□□□□□ -0.77
CSGALNACT1-202ENST00000397998 DHDHQ9UQ10 334 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms