RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 POC1BQ8TC44 478 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 SAMD8Q96LT4 415 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 PTDSS2Q9BVG9 487 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 PLA2G12AQ9BZM1 189 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 MCCC2Q9HCC0 563 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 FANCFQ9NPI8 374 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 ALKBH4Q9NXW9 302 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 KLHL21Q9UJP4 597 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 C17orf51A8MQB3 221 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 UQCRC1P31930 480 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 RPS5P46782 204 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 CSNK2A1P68400 391 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 EFNB1P98172 346 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 ZP4Q12836 540 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 TMED1Q13445 227 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 RAET1LQ5VY80 246 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 CCDC71Q8IV32 467 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 SULF2Q8IWU5 870 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 OR51A7Q8NH64 312 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 TMEM163Q8TC26 289 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 ZNF524Q96C55 264 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 TNFRSF13CQ96RJ3 184 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 IFT27Q9BW83 186 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 NRIP3Q9NQ35 241 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 CMC2Q9NRP2 79 aa17.18■□□□□ 0.34
TSPAN4-204ENST00000397404 TRAV27A0A087WT01 109 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 A0A087WXM4 84 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 SURF4O15260 269 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 EIF1BO60739 113 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 OR6A2O95222 327 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 PMS2P2O95744 297 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 ZNF3P17036 446 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 SPINK2P20155 84 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 PAICSP22234 425 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 CRHBPP24387 322 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 GDF1P27539 372 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 NOS3P29474 1203 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 TMPRSS3P57727 454 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 INPP5JQ15735 1006 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 ZNF239Q16600 458 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 ALG10Q5BKT4 473 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 POMZP3Q6PJE2 187 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 ZADH2Q8N4Q0 377 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 OR8D4Q8NGM9 314 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 KLHDC3Q9BQ90 382 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 MRPS26Q9BYN8 205 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 ZNF703Q9H7S9 590 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 DEPPQ9NTK1 212 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 TVP23BQ9NYZ1 205 aa17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 CNOT2Q9NZN8 540 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-204ENST00000397404 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.17■□□□□ 0.343e-6■■■■□ 25.7
TSPAN4-204ENST00000397404 CNTRLQ7Z7A1 2325 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 OR2M5A3KFT3 312 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 RIIAD1A6NNX1 92 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 FTCDNL1E5RQL4 147 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 K7ENP7 123 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 SLC1A7O00341 560 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 GLSO94925 669 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 CD14P08571 375 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 TFPIP10646 304 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 RPL4P36578 427 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 FXYD6P3P58550 94 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 SLC35A1P78382 337 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 FHL1Q13642 323 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 CLEC12AQ5QGZ9 265 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 PDSS1Q5T2R2 415 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 ARMC4Q5T2S8 1044 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 FAM205BPQ63HN1 556 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 ACSM5Q6NUN0 579 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 INO80CQ6PI98 192 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 ASB18Q6ZVZ8 466 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 H1FNTQ75WM6 255 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 HDDC2Q7Z4H3 204 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 GID4Q8IVV7 300 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 OR14L1PQ8NHC6 308 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 MIB2Q96AX9 1013 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 ACKR4Q9NPB9 350 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 BATF3Q9NR55 127 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 ZNF226Q9NYT6 803 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 PLA2G3Q9NZ20 509 aa17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 RPL36Q9Y3U8 105 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-204ENST00000397404 SPTBN4Q9H254 2564 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 SPTBN2O15020 2390 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 CEP295Q9C0D2 2601 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 EFCAB10A6NFE3 127 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 LIPT2A6NK58 231 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 MKRN2OSH3BPM6 223 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 VAMP5O95183 116 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 TXNDC12O95881 172 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 CCNA2P20248 432 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 FOXK2Q01167 660 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 CTU2Q2VPK5 515 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 TMEM236Q5W0B7 351 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 BORAQ6PGQ7 559 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 Q6ZPB1 254 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 FAM83FQ8NEG4 500 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 TSPAN14Q8NG11 270 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 SNRNP27Q8WVK2 155 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 ZHX1-C8orf76Q96EF9 292 aa17.15■□□□□ 0.34
TSPAN4-204ENST00000397404 MOGAT1Q96PD6 335 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms