RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ALG1L2C9J202 215 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 MKRN2OSH3BPM6 223 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 SCO2O43819 266 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 CCL3P10147 92 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
CAPN3-207ENST00000397200 CLK1P49759 484 aaKnown RBP13.54□□□□□ -0.24
CAPN3-207ENST00000397200 FXYD6P3P58550 94 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.54□□□□□ -0.24
CAPN3-207ENST00000397200 MLLT11Q13015 90 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-207ENST00000397200 MED22Q15528 200 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 OR1C1Q15619 314 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 KLHL22Q53GT1 634 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 RPL13AP3Q6NVV1 102 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 MARCH3Q86UD3 253 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 OR6Q1Q8NGQ2 317 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 PHOSPHO1Q8TCT1 267 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 HAS2Q92819 552 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 EXTL1Q92935 676 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 HS6ST2Q96MM7 605 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 TRIM2Q9C040 744 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 NXF2Q9GZY0 626 aaKnown RBP13.54□□□□□ -0.24
CAPN3-207ENST00000397200 HHATLQ9HCP6 504 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 SH2D2AQ9NP31 389 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 CCDC59Q9P031 241 aaKnown RBP13.54□□□□□ -0.24
CAPN3-207ENST00000397200 CLEC2DQ9UHP7 191 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 ZMIZ1Q9ULJ6 1067 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 ERGIC3Q9Y282 383 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 EML6Q6ZMW3 1958 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 LAMA5O15230 3695 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 UNC119BA6NIH7 251 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 METTL15A6NJ78 407 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 NDUFB5O43674 189 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ADAM11O75078 769 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 P04436 131 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TGFBR1P36897 503 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 CASP3P42574 277 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SPHARQ15513 63 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TSTQ16762 297 aaKnown RBP13.53□□□□□ -0.24
CAPN3-207ENST00000397200 C11orf91Q3C1V1 193 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 BICRALQ6AI39 1079 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SPINK14Q6IE38 97 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SLC30A6Q6NXT4 461 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TMEM81Q6P7N7 255 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 IGFL2Q6UWQ7 119 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 APOOLQ6UXV4 268 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 LINC00114Q6XXX2 140 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 MDGA2Q7Z553 956 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF227Q86WZ6 799 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 GATSQ8NAP1 163 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 PSD4Q8NDX1 1056 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ANKK1Q8NFD2 765 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 KBTBD8Q8NFY9 601 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 OR2T33Q8NG76 320 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 FNDC8Q8TC99 324 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 RNF138Q8WVD3 245 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 S100ZQ8WXG8 99 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TM9SF4Q92544 642 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SIGLEC12Q96PQ1 595 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 JAM3Q9BX67 310 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TEX12Q9BXU0 123 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.53□□□□□ -0.24
CAPN3-207ENST00000397200 OR51E2Q9H255 320 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TMEM27Q9HBJ8 222 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SACM1LQ9NTJ5 587 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SLC35A3Q9Y2D2 325 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 CORINQ9Y5Q5 1042 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 A0A1B0GWA3 101 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TMEM129A0AVI4 362 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 CLDN25C9JDP6 229 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 GTPBP1O00178 669 aaKnown RBP13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SLC25A12O75746 678 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 NEURL1O76050 574 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 CSTAP01040 98 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 HMGN1P05114 100 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 MAKP20794 623 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 IDUAP35475 653 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ADH7P40394 386 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SNTA1Q13424 505 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF846Q147U1 533 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 PRAMEF20Q5VT98 475 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF550Q7Z398 422 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ZBTB46Q86UZ6 589 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 MISPQ8IVT2 679 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SLC43A2Q8N370 569 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 MFSD4AQ8N468 514 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 FAM71CQ8NEG0 241 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 RFKQ969G6 155 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 RNFT2Q96EX2 444 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 WDR12Q9GZL7 423 aaKnown RBP13.53□□□□□ -0.24
CAPN3-207ENST00000397200 OR52D1Q9H346 318 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 UBQLN3Q9H347 655 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 FN3KQ9H479 309 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 GALNT9Q9HCQ5 603 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 HMG20AQ9NP66 347 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 ISYNA1Q9NPH2 558 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 SDHAF3Q9NRP4 125 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 C20orf141Q9NUB4 165 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms