RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 TIPRLO75663 272 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 KRT36O76013 467 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 IFNA2P01563 188 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 LOXP28300 417 aaPredicted RBP12.23□□□□□ -0.45
SEC13-205ENST00000397101 CD79BP40259 229 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 TAS2R41P59536 307 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 HOXC5Q00444 222 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 ZNF117Q03924 483 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 CBFBQ13951 182 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 NRF1Q16656 503 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 AAGABQ6PD74 315 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 PLEKHM3Q6ZWE6 761 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 YRDCQ86U90 279 aaKnown RBP12.23□□□□□ -0.45
SEC13-205ENST00000397101 RBM45Q8IUH3 476 aaKnown RBP12.23□□□□□ -0.45
SEC13-205ENST00000397101 GRAMD2AQ8IUY3 354 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 PHC2Q8IXK0 858 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 CADM2Q8N3J6 435 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 DTNBP1Q96EV8 351 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 PIK3IP1Q96FE7 263 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 AMBRA1Q9C0C7 1298 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 DSN1Q9H410 356 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 TMEM27Q9HBJ8 222 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 CTPS2Q9NRF8 586 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 ELOVL5Q9NYP7 299 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 SELENONQ9NZV5 590 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 MED11Q9P086 117 aa12.23□□□□□ -0.45
SEC13-205ENST00000397101 DSCAMO60469 2012 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 A0A1W2PNV4 684 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 CPSF4LA6NMK7 179 aaKnown RBP12.22□□□□□ -0.45
SEC13-205ENST00000397101 TMEM229AB2RXF0 380 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 OIP5O43482 229 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 BCAS1O75363 584 aaPredicted RBP12.22□□□□□ -0.45
SEC13-205ENST00000397101 CBR3O75828 277 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 DIRAS1O95057 198 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 CST1P01037 141 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 PGCP20142 388 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 PTGDSP41222 190 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 SLC6A8P48029 635 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 P2RX1P51575 399 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 GFRA1P56159 465 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 OR2A2Q6IF42 318 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 COMTD1Q86VU5 262 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 OR6T1Q8NGN1 323 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 STARD4Q96DR4 205 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 ZNF347Q96SE7 839 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 MED18Q9BUE0 208 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 RTN4RQ9BZR6 473 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 CXorf56Q9H5V9 222 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 PTGES2Q9H7Z7 377 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 IL1RAPQ9NPH3 570 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 EXOSC3Q9NQT5 275 aaKnown RBP12.22□□□□□ -0.45
SEC13-205ENST00000397101 MRPS18CQ9Y3D5 142 aaKnown RBP12.22□□□□□ -0.45
SEC13-205ENST00000397101 CHST2Q9Y4C5 530 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 ENPP4Q9Y6X5 453 aa12.22□□□□□ -0.45
SEC13-205ENST00000397101 C17orf51A8MQB3 221 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 F12P00748 615 aaPredicted RBP12.21□□□□□ -0.45
SEC13-205ENST00000397101 FCGR1AP12314 374 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 PRG2P13727 222 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 FASP25445 335 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 UGT2B10P36537 528 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 IDH2P48735 452 aaKnown RBP12.21□□□□□ -0.45
SEC13-205ENST00000397101 LHX2P50458 406 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 ZNF41P51814 821 aaPredicted RBP12.21□□□□□ -0.45
SEC13-205ENST00000397101 GAS1P54826 345 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 VLDLRP98155 873 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 SPIBQ01892 262 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 EPS8Q12929 822 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 SKP2Q13309 424 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 RCN1Q15293 331 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 BCL2A1Q16548 175 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 ENTPD8Q5MY95 495 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 HMBOX1Q6NT76 420 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 CBLN3Q6UW01 205 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 PLCZ1Q86YW0 608 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 GCNT2Q8N0V5 402 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 OR4D11Q8NGI4 311 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 OR5W2Q8NH69 310 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 SLCO4A1Q96BD0 722 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 DUS3LQ96G46 650 aaKnown RBP12.21□□□□□ -0.45
SEC13-205ENST00000397101 ZNF300Q96RE9 604 aaPredicted RBP12.21□□□□□ -0.45
SEC13-205ENST00000397101 WFDC6Q9BQY6 131 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 FNDC11Q9BVV2 318 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 RSPO3Q9BXY4 272 aaPredicted RBP12.21□□□□□ -0.45
SEC13-205ENST00000397101 TRIM2Q9C040 744 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 ARMC1Q9NVT9 282 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 RHCGQ9UBD6 479 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 TESQ9UGI8 421 aaKnown RBP12.21□□□□□ -0.45
SEC13-205ENST00000397101 DKKL1Q9UK85 242 aa12.21□□□□□ -0.45
SEC13-205ENST00000397101 MED12LQ86YW9 2145 aa12.2□□□□□ -0.46
SEC13-205ENST00000397101 J3KTA2 159 aa12.2□□□□□ -0.46
SEC13-205ENST00000397101 TLX2O43763 284 aaPredicted RBP12.2□□□□□ -0.46
SEC13-205ENST00000397101 SEMG1P04279 462 aa12.2□□□□□ -0.46
SEC13-205ENST00000397101 ZNF708P17019 499 aa12.2□□□□□ -0.46
SEC13-205ENST00000397101 RHCEP18577 417 aa12.2□□□□□ -0.46
SEC13-205ENST00000397101 TCEA1P23193 301 aaKnown RBP12.2□□□□□ -0.46
SEC13-205ENST00000397101 CCKARP32238 428 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms