RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 ZNF142P52746 1687 aaPredicted RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 LILRB3O75022 631 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 GASTP01350 101 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 EPHA1P21709 976 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 HOXC13P31276 330 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 MTNR1BP49286 362 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 ERVK-16P61578 105 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SYT6Q5T7P8 510 aaPredicted RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 MRPL21Q7Z2W9 205 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 LAX1Q8IWV1 398 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 OR4D6Q8NGJ1 314 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 OR51Q1Q8NH59 317 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 OR14L1PQ8NHC6 308 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 TXNDC15Q96J42 360 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 LINC00597Q9H2U6 94 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 CHRDQ9H2X0 955 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 CDH20Q9HBT6 801 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SH3BGRL2Q9UJC5 107 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 KIR2DS5A0A0G2JLQ3 304 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 A0A0G2JNG1 304 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 BLACEA4D250 179 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 H3BML4 177 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 KIR2DS3K7RE56 304 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC16A7O60669 478 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 TACR1P25103 407 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 KCNJ10P78508 379 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 REEP5Q00765 189 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 KIR2DS5Q14953 304 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 OPCMLQ14982 345 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 ACTBL2Q562R1 376 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 MEX3BQ6ZN04 569 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 PARS2Q7L3T8 475 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 KANSL1Q7Z3B3 1105 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 ACKR4Q9NPB9 350 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 DIMT1Q9UNQ2 313 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 USP22Q9UPT9 525 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 FBXO7Q9Y3I1 522 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 H0Y8G0 127 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 GPR75O95800 540 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 IRF2P14316 349 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 BMPR1AP36894 532 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 GPR85P60893 370 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 RPS15P62841 145 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 MBTPS1Q14703 1052 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 ABHD12BQ7Z5M8 362 aaPredicted RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 KDM8Q8N371 416 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 ABHD5Q8WTS1 349 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SORCS2Q96PQ0 1159 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 OR5B2Q96R09 309 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SIAEQ9HAT2 523 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SCPEP1Q9HB40 452 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 C1GALT1Q9NS00 363 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 TAS2R16Q9NYV7 291 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 TP53TG5Q9Y2B4 290 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 A0A0A6YYC8 382 aaPredicted RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 ARGFXA6NJG6 315 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 I3L1I5 382 aaPredicted RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 ZNF217O75362 1048 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 UBL3O95164 117 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 LIPCP11150 499 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 CPMP14384 443 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SFTPDP35247 375 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 EMP2P54851 167 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 GRB2P62993 217 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 PDE7AQ13946 482 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 LYPD4Q6UWN0 246 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SBSNQ6UWP8 590 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 IL20RBQ6UXL0 311 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 MAVSQ7Z434 540 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 NAA40Q86UY6 237 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 CMIPQ8IY22 773 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 L3MBTL4Q8NA19 623 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 MZB1Q8WU39 189 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 PLEK2Q9NYT0 353 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 LHX3Q9UBR4 397 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 PURGQ9UJV8 347 aaKnown RBP9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 OSGIN1Q9UJX0 560 aa9.56□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC22A23A1A5C7 686 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 SGK494L7N484 410 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 RPS25P62851 125 aaKnown RBP9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 SORDQ00796 357 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 PRDX1Q06830 199 aaKnown RBP9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 PDZK1IP1Q13113 114 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 Q6ZSR9 355 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 LIX1LQ8IVB5 337 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 OR10Z1Q8NGY1 313 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 C22orf15Q8WYQ4 148 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 ISL2Q96A47 359 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 LRFN5Q96NI6 719 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 NECTIN4Q96NY8 510 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC6A17Q9H1V8 727 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 ELOVL3Q9HB03 270 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 UBQLN4Q9NRR5 601 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 B3GNT2Q9NY97 397 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 HEMK1Q9Y5R4 338 aaPredicted RBP9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 CITO14578 2027 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 TMEM269A0A1B0GVZ9 245 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 TMEM82A0PJX8 343 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 SDC3O75056 442 aa9.55□□□□□ -0.88
LIMCH1-203ENST00000396595 LDB3O75112 727 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms