RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RDH8Q9NYR8 311 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 TAS2R5Q9NYW4 299 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 HCN3Q9P1Z3 774 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 KLHL9Q9P2J3 617 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 PIAS3Q9Y6X2 628 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 A0A0B4J2E0 115 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 A0A1B0GX12 115 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 A0A1W2PPC1 479 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 A0A1W2PPK0 400 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 A0A1W2PQF6 199 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 ANKRD20A5PA0PJZ0 165 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 IFITM5A6NNB3 132 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 SNRPGP15A8MWD9 76 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 PIN1P1O15428 100 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 KCNJ13O60928 360 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 TPPPO94811 219 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 EGFP01133 1207 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 IFNGP01579 166 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 SRMP19623 302 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 DRD1P21728 446 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 SDHBP21912 280 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 RAP2BP61225 183 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF626Q68DY1 528 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 FCRLBQ6BAA4 426 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 FAM198BQ6UWH4 519 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 KIAA1324Q6UXG2 1013 aaKnown RBP12.24□□□□□ -0.45
TRIM40-207ENST00000396581 KANSL1Q7Z3B3 1105 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 PAQR7Q86WK9 346 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 KCT2Q8NC54 265 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 OR52I2Q8NH67 350 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF671Q8TAW3 534 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 DERL3Q96Q80 235 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 AIFM2Q9BRQ8 373 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 MRI1Q9BV20 369 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 SHARPINQ9H0F6 387 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 CHRNA9Q9UGM1 479 aa12.24□□□□□ -0.45
TRIM40-207ENST00000396581 PPIEQ9UNP9 301 aaKnown RBP12.24□□□□□ -0.45
TRIM40-207ENST00000396581 A0A087WV62 115 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 A0A1W2PP55 124 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF879B4DU55 563 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 PEX12O00623 359 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 B3GALNT1O75752 331 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 KRT33AO76009 404 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 PCDH8O95206 1070 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 GYPBP06028 91 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 IFI6P09912 130 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 SLC6A6P31641 620 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 RBM34P42696 430 aaKnown RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 PTH2RP49190 550 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 MAP2K6P52564 334 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 PPP2CBP62714 309 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 PPP2CAP67775 309 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 RPL6Q02878 288 aaKnown RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 ZSWIM7Q19AV6 140 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 B3GNTL1Q67FW5 361 aaPredicted RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 MTFR2Q6P444 385 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 ZCCHC12Q6PEW1 402 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 LINGO2Q7L985 606 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 OVCH2Q7RTZ1 564 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 CACUL1Q86Y37 369 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 IZUMO1Q8IYV9 350 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 OR51A7Q8NH64 312 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 OR14A16Q8NHC5 309 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 THEM6Q8WUY1 208 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 CNN2Q99439 309 aaKnown RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF559Q9BR84 538 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 OR10A4Q9H209 315 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 SDHAF2Q9NX18 166 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 NKIRAS2Q9NYR9 191 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 MGAT4CQ9UBM8 478 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 SCML1Q9UN30 329 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 OR1A2Q9Y585 309 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 TRBV2A0A0J9YWF9 115 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 MCRIP1C9JLW8 97 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 PDCD5O14737 125 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 ARPC1BO15143 372 aaKnown RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 AK1P00568 194 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 HRGP04196 525 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 ALDOBP05062 364 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF888P0CJ79 500 aaPredicted RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 RPS15AP62244 130 aaKnown RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 TRMT12Q53H54 448 aaKnown RBP12.23□□□□□ -0.45
TRIM40-207ENST00000396581 COL26A1Q96A83 441 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 TNFRSF13CQ96RJ3 184 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 NOX3Q9HBY0 568 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 CA10Q9NS85 328 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 FBXO34Q9NWN3 711 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 COQ3Q9NZJ6 369 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 KCNK6Q9Y257 313 aa12.23□□□□□ -0.45
TRIM40-207ENST00000396581 OR52A4PA6NMU1 304 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 A8MXK9 166 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 LATO43561 262 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NMBP08949 121 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 RAB40ALP0C0E4 278 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 CPMP14384 443 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 GLULP15104 373 aa12.22□□□□□ -0.45
TRIM40-207ENST00000396581 NFYAP23511 347 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-207ENST00000396581 RAD52P43351 418 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms