RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MAD2L1Q13257 205 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-202ENST00000393773 C3orf36Q3SXR2 165 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 MYPOPQ86VE0 399 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-202ENST00000393773 CMIPQ8IY22 773 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 ZNF540Q8NDQ6 660 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 PMM1Q92871 262 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 HPS1Q92902 700 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 SF3B5Q9BWJ5 86 aaKnown RBP13.34□□□□□ -0.27
CHMP3-202ENST00000393773 SLC38A1Q9H2H9 487 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 PIF1Q9H611 641 aa13.34□□□□□ -0.27
CHMP3-202ENST00000393773 AGAP5A6NIR3 686 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 HMGN4O00479 90 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 GPIP06744 558 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 CHRM4P08173 479 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 IGFBP1P08833 259 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-202ENST00000393773 DAOP14920 347 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 APEX1P27695 318 aaKnown RBP13.33□□□□□ -0.28
CHMP3-202ENST00000393773 CFPP27918 469 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 MAP2K6P52564 334 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 CHN2P52757 468 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 CDH15P55291 814 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 TUBA1BP68363 451 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 TUBA4AP68366 448 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 RUNX1T1Q06455 604 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 EPS8Q12929 822 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 CEACAM7Q14002 265 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 GPAT3Q53EU6 434 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 VHLLQ6RSH7 139 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 TUBA1AQ71U36 451 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 ABHD12BQ7Z5M8 362 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-202ENST00000393773 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 SEMA6DQ8NFY4 1073 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 BCL2L2Q92843 193 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-202ENST00000393773 AURKBQ96GD4 344 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-202ENST00000393773 PLA2G12AQ9BZM1 189 aa13.33□□□□□ -0.28
CHMP3-202ENST00000393773 TMEFF2Q9UIK5 374 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-202ENST00000393773 ZNF587BE7ETH6 402 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 NR5A2O00482 541 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 FRS3O43559 492 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 IGKV3-15P01624 115 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 SELENOPP49908 381 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 HGFACQ04756 655 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 OR7A5Q15622 319 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 SYPL1Q16563 259 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 SMU1Q2TAY7 513 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 MRPL2Q5T653 305 aaKnown RBP13.32□□□□□ -0.28
CHMP3-202ENST00000393773 ANKRD16Q6P6B7 361 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 GPAT4Q86UL3 456 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 ANKFN1Q8N957 763 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 LINC01356Q8N9X3 169 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 MAGEE2Q8TD90 523 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-202ENST00000393773 WDR60Q8WVS4 1066 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 TESCQ96BS2 214 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 ZNF317Q96PQ6 595 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-202ENST00000393773 TRNT1Q96Q11 434 aaKnown RBP13.32□□□□□ -0.28
CHMP3-202ENST00000393773 SNX18Q96RF0 628 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 SLC35A5Q9BS91 424 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 ADAM19Q9H013 955 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 RAB1BQ9H0U4 201 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 ZNF442Q9H7R0 627 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 TMEM45AQ9NWC5 275 aa13.32□□□□□ -0.28
CHMP3-202ENST00000393773 MARCOQ9UEW3 520 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-202ENST00000393773 PRSS51A0A1B0GVH4 220 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 hCG_2039718K7EN88 272 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 CELA3BP08861 270 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 PAX7P23759 505 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 SRP14P37108 136 aaKnown RBP13.31□□□□□ -0.28
CHMP3-202ENST00000393773 UBE2NP61088 152 aaKnown RBP13.31□□□□□ -0.28
CHMP3-202ENST00000393773 RIN1Q13671 783 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 CASP8Q14790 479 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 TRIP10Q15642 601 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 ZCCHC24Q8N2G6 241 aaKnown RBP13.31□□□□□ -0.28
CHMP3-202ENST00000393773 ZNF786Q8N393 782 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 SVOPLQ8N434 492 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 OR4F15Q8NGB8 312 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 TCP10LQ8TDR4 215 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 ZIM3Q96PE6 472 aa13.31□□□□□ -0.28
CHMP3-202ENST00000393773 A0A096LPE4 126 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 A0A1W2PPZ6 126 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 ZNF503-AS2A6NEH8 195 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 SPAG7O75391 227 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 UPK3AO75631 287 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 SNUPNO95149 360 aaKnown RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 CPSF4O95639 269 aaKnown RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 NUDT17P0C025 328 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 THBS4P35443 961 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 CHI3L1P36222 383 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 DVL1P1P54792 670 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 PDCD2Q16342 344 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 SPANXN4Q5MJ08 99 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 C12orf54Q6X4T0 127 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 RINLQ6ZS11 566 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 CREB3L2Q70SY1 520 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 RNF130Q86XS8 419 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 EPHX4Q8IUS5 362 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 FAM169BQ8N8A8 192 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 EIF1ADQ8N9N8 165 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms