RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ITGADQ13349 1161 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CRMP1Q14194 572 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 IRF3Q14653 427 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 TGIF1Q15583 401 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 TIGD6Q17RP2 521 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ALG10Q5BKT4 473 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ACER2Q5QJU3 275 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 SYT6Q5T7P8 510 aaPredicted RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 ZNF468Q5VIY5 522 aaPredicted RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 UBE2UQ5VVX9 321 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 B3GNT6Q6ZMB0 384 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 SHFQ7M4L6 423 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 MAMDC2Q7Z304 686 aaPredicted RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 GID4Q8IVV7 300 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 GHDCQ8N2G8 530 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 WDSUB1Q8N9V3 476 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 OR2M3Q8NG83 312 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 LIPHQ8WWY8 451 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 C12orf43Q96C57 262 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 SECISBP2Q96T21 854 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 TSC22D3Q99576 134 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 NPAS1Q99742 590 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 KATNB1Q9BVA0 655 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CDCA4Q9BXL8 241 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 FN3KQ9H479 309 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 FKRPQ9H9S5 495 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CPNE5Q9HCH3 593 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CHCHD3Q9NX63 227 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 CHRNA9Q9UGM1 479 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CLEC2DQ9UHP7 191 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 KLHL21Q9UJP4 597 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ZNF229Q9UJW7 825 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 FBXL2Q9UKC9 423 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 PCDHGB6Q9Y5F9 930 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 C11orf98E9PRG8 122 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 MYL12BO14950 172 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 OR6A2O95222 327 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 F10P00742 488 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 P04436 131 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 F13BP05160 661 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 MYL12AP19105 171 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 NR4A1P22736 598 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 AHCYP23526 432 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 ITGA3P26006 1051 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 HTR1FP30939 366 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 CTXN1P60606 82 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 RPS4XP62701 263 aaKnown RBP7.82□□□□□ -1.16
TDP1-203ENST00000393454 OC90Q02509 493 aaPredicted RBP7.82□□□□□ -1.16
TDP1-203ENST00000393454 RPL18Q07020 188 aaKnown RBP7.82□□□□□ -1.16
TDP1-203ENST00000393454 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.82□□□□□ -1.16
TDP1-203ENST00000393454 DBPQ10586 325 aaPredicted RBP7.82□□□□□ -1.16
TDP1-203ENST00000393454 FAM69AQ5T7M9 428 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 H3F3CQ6NXT2 135 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 B3GLCTQ6Y288 498 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 MEPCEQ7L2J0 689 aaKnown RBP7.82□□□□□ -1.16
TDP1-203ENST00000393454 ASCL5Q7RTU5 278 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 PLCZ1Q86YW0 608 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 GALNT15Q8N3T1 639 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 SLC37A3Q8NCC5 494 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 SDR9C7Q8NEX9 313 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 OR4F15Q8NGB8 312 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 OR5M1Q8NGP8 315 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 ZNF420Q8TAQ5 688 aaPredicted RBP7.82□□□□□ -1.16
TDP1-203ENST00000393454 STK35Q8TDR2 534 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 PAQR8Q8TEZ7 354 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 DDIT4LQ96D03 193 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 SGCZQ96LD1 299 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 IP6K3Q96PC2 410 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 FUNDC2Q9BWH2 189 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 HCAR1Q9BXC0 346 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 ANGPTL4Q9BY76 406 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 FAM117AQ9C073 453 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 STMN3Q9NZ72 180 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 HIF3AQ9Y2N7 669 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 CPAMD8Q8IZJ3 1885 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 PCSK5Q92824 1860 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 DOCK10Q96BY6 2186 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 H3BML4 177 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 H3BMQ9 156 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 M0R3G1 203 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 RNF13O43567 381 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 MT-ATP6P00846 226 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 OPN1LWP04000 364 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 GYPBP06028 91 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 CD14P08571 375 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 GTF2E2P29084 291 aaKnown RBP7.82□□□□□ -1.16
TDP1-203ENST00000393454 GRPRP30550 384 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 TMBIM6P55061 237 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 PLPPR5Q32ZL2 321 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 ANKDD1AQ495B1 522 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 DCAF10Q5QP82 559 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 NIPAL3Q6P499 406 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 PAQR6Q6TCH4 344 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 C5orf46Q6UWT4 87 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 ZNF367Q7RTV3 350 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 MDGA2Q7Z553 956 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 JAZF1Q86VZ6 243 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 BEST3Q8N1M1 668 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 ARMC10Q8N2F6 343 aa7.82□□□□□ -1.16
TDP1-203ENST00000393454 OR51G2Q8NGK0 314 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms