RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 COL28A1Q2UY09 1125 aa7.47□□□□□ -1.21
ATXN3-203ENST00000393287 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-203ENST00000393287 GDF7Q7Z4P5 450 aa7.47□□□□□ -1.21
ATXN3-203ENST00000393287 CEACAM19Q7Z692 300 aa7.47□□□□□ -1.21
ATXN3-203ENST00000393287 CLIP4Q8N3C7 705 aa7.47□□□□□ -1.21
ATXN3-203ENST00000393287 NUBPLQ8TB37 319 aa7.47□□□□□ -1.21
ATXN3-203ENST00000393287 ENPP5Q9UJA9 477 aa7.47□□□□□ -1.21
ATXN3-203ENST00000393287 PAIP2BQ9ULR5 123 aaKnown RBP7.47□□□□□ -1.21
ATXN3-203ENST00000393287 GRIP1Q9Y3R0 1128 aa7.47□□□□□ -1.21
ATXN3-203ENST00000393287 FAM172BPA6NC97 362 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 CDRT1O95170 752 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 CNR1P21554 472 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 BMXP51813 675 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 NKD1Q969G9 470 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 C16orf58Q96GQ5 468 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 ALG8Q9BVK2 526 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 EXOSC3Q9NQT5 275 aaKnown RBP7.46□□□□□ -1.21
ATXN3-203ENST00000393287 SCN1AP35498 2009 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 PRAMEF27A3QJZ7 478 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 NKX6-3A6NJ46 265 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 LRRC30A6NM36 301 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 PATE3B3GLJ2 98 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 H7C1Q1 480 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 ELK4P28324 431 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 PIGAP37287 484 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 NXNL2Q5VZ03 156 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 PGAP1Q75T13 922 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 SPATC1Q76KD6 591 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 MUS81Q96NY9 551 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 CSF3RQ99062 836 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 SDF2Q99470 211 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 TCEAL2Q9H3H9 227 aaPredicted RBP7.46□□□□□ -1.21
ATXN3-203ENST00000393287 CCDC86Q9H6F5 360 aaKnown RBP7.46□□□□□ -1.21
ATXN3-203ENST00000393287 LHX9Q9NQ69 397 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 ACER3Q9NUN7 267 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 ZNF222Q9UK12 451 aa7.46□□□□□ -1.21
ATXN3-203ENST00000393287 hCG_1809904A0A1W2PP81 198 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 A0A1W2PPE2 198 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 A0A1W2PR64 198 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 A0A1W2PRV1 198 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 SNAP29O95721 258 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 MLLT10P55197 1068 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 ERVK-25P63136 954 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 RUNX2Q13950 521 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF766Q5HY98 468 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 MUL1Q969V5 352 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 USB1Q9BQ65 265 aaKnown RBP7.46□□□□□ -1.22
ATXN3-203ENST00000393287 WDR76Q9H967 626 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 SPATA2Q9UM82 520 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 KNTC1P50748 2209 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 FBP2O00757 339 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 TPOP07202 933 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 HOXD4P09016 255 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-203ENST00000393287 GPR85P60893 370 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 OR1C1Q15619 314 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 PRAMEF20Q5VT98 475 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 DOK4Q8TEW6 326 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 EGLN2Q96KS0 407 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 DNTTIP1Q9H147 329 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 HHLA2Q9UM44 414 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 TMEM212A6NML5 194 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 SLC1A7O00341 560 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 HMGN4O00479 90 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF195O14628 629 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 KLK10O43240 276 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 OR2T7P0C7T2 308 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 TACR1P25103 407 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 PTGER4P35408 488 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 RPL27P61353 136 aaKnown RBP7.46□□□□□ -1.22
ATXN3-203ENST00000393287 KCNJ8Q15842 424 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.46□□□□□ -1.22
ATXN3-203ENST00000393287 THEM4Q5T1C6 240 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 CGB2Q6NT52 195 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 OR2L13Q8N349 312 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 OR2T27Q8NH04 317 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 NEIL3Q8TAT5 605 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 SLC35A4Q96G79 324 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 TPK1Q9H3S4 243 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 TMEM185BQ9H7F4 350 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 ZFP57Q9NU63 452 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 MED11Q9P086 117 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 COMMD3Q9UBI1 195 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 MGAT4AQ9UM21 535 aa7.46□□□□□ -1.22
ATXN3-203ENST00000393287 ZSWIM8A7E2V4 1837 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 hCG_2014768A0A024R1R8 64 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 HMX2A2RU54 273 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 CDHR4A6H8M9 788 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 KIAA0513O60268 411 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 FZD7O75084 574 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PET100P0DJ07 73 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ART1P52961 327 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 SPIN3Q5JUX0 258 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF584Q8IVC4 421 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 LRFN3Q9BTN0 628 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 EGLN1Q9GZT9 426 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 AASSQ9UDR5 926 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 A0A075B6Q4 140 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 NPIPB8E9PQR5 432 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 L7N2F9 121 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 HSPA12AO43301 675 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms