RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 NANOGNBQ7Z5D8 188 aa22.91■■□□□ 1.26
SHOX2-201ENST00000389589 LRRC75AQ8NAA5 344 aa22.91■■□□□ 1.26
SHOX2-201ENST00000389589 TMEM234Q8WY98 164 aa22.91■■□□□ 1.26
SHOX2-201ENST00000389589 TAAR8Q969N4 342 aa22.91■■□□□ 1.26
SHOX2-201ENST00000389589 OCEL1Q9H607 264 aa22.91■■□□□ 1.26
SHOX2-201ENST00000389589 TXNL4BQ9NX01 149 aaKnown RBP22.91■■□□□ 1.26
SHOX2-201ENST00000389589 KIF26BQ2KJY2 2108 aa22.91■■□□□ 1.26
SHOX2-201ENST00000389589 A0A1B0GVG6 124 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 LNP1A1A4G5 178 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 J3QRK9 145 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 IDUAP35475 653 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 CAPZA2P47755 286 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 COL28A1Q2UY09 1125 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 SLC35D3Q5M8T2 416 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 NPEPL1Q8NDH3 523 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 SLC22A8Q8TCC7 542 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 RNF138Q8WVD3 245 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 KLHL1Q9NR64 748 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 FBXL4Q9UKA2 621 aa22.9■■□□□ 1.26
SHOX2-201ENST00000389589 TMED7-TICAM2A0A0A6YYA0 188 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 GPR50Q13585 617 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 GGTLC2Q14390 218 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 ZNF517Q6ZMY9 492 aaPredicted RBP22.89■■□□□ 1.26
SHOX2-201ENST00000389589 MFSD4AQ8N468 514 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 POMGNT2Q8NAT1 580 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 SMPDL3BQ92485 455 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 C1GALT1C1Q96EU7 318 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 TRMT61AQ96FX7 289 aaKnown RBP22.89■■□□□ 1.26
SHOX2-201ENST00000389589 DDOQ99489 341 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 COQ7Q99807 217 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 DEFB126Q9BYW3 111 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 C6orf62Q9GZU0 229 aaPredicted RBP22.89■■□□□ 1.26
SHOX2-201ENST00000389589 TMED7Q9Y3B3 224 aa22.89■■□□□ 1.26
SHOX2-201ENST00000389589 ANKUB1A6NFN9 424 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 LALBAP00709 142 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 MT-ATP6P00846 226 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 BGLAPP02818 100 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 GYPBP06028 91 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 BMP4P12644 408 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 RPS5P46782 204 aaKnown RBP22.89■■□□□ 1.25
SHOX2-201ENST00000389589 RPS25P62851 125 aaKnown RBP22.89■■□□□ 1.25
SHOX2-201ENST00000389589 INAQ16352 499 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 C5orf46Q6UWT4 87 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 WDR70Q9NW82 654 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 TOR4AQ9NXH8 423 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 BABAM2Q9NXR7 383 aa22.89■■□□□ 1.25
SHOX2-201ENST00000389589 TXNDC12O95881 172 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 S100A5P33763 92 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 CTXN1P60606 82 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 IL10RAQ13651 578 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 PCOLCEQ15113 449 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 PON3Q15166 354 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 EMC4Q5J8M3 183 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 CD200R1LQ6Q8B3 271 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 KLBQ86Z14 1044 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 GPALPP1Q8IXQ4 340 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 ATP6V1C2Q8NEY4 427 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 ELP5Q8TE02 316 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 ST8SIA1Q92185 356 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 TMEM203Q969S6 136 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 NMNAT3Q96T66 252 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 TBX5Q99593 518 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 NMNAT2Q9BZQ4 307 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 GSTK1Q9Y2Q3 226 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 PTRH2Q9Y3E5 179 aaKnown RBP22.88■■□□□ 1.25
SHOX2-201ENST00000389589 PCDHGB7Q9Y5F8 929 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 PEX16Q9Y5Y5 336 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 PNMA8CA0A1B0GUJ8 204 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 A8MVM7 634 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 SUSD5O60279 629 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 MRPL3P09001 348 aaKnown RBP22.88■■□□□ 1.25
SHOX2-201ENST00000389589 FGF9P31371 208 aaPredicted RBP22.88■■□□□ 1.25
SHOX2-201ENST00000389589 MUC3AQ02505 3323 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 RPL18Q07020 188 aaKnown RBP22.88■■□□□ 1.25
SHOX2-201ENST00000389589 POMZP3Q6PJE2 187 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 MAMDC2Q7Z304 686 aaPredicted RBP22.88■■□□□ 1.25
SHOX2-201ENST00000389589 FAM122BQ7Z309 247 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 STK35Q8TDR2 534 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 RASD2Q96D21 266 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 ASB6Q9NWX5 421 aa22.88■■□□□ 1.25
SHOX2-201ENST00000389589 VPS13AQ96RL7 3174 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 TRDV1A0A1B0GX56 115 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 MT-ND5P03915 603 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 SDHAP31040 664 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 RPS19P39019 145 aaKnown RBP22.87■■□□□ 1.25
SHOX2-201ENST00000389589 CRTC2Q53ET0 693 aaPredicted RBP22.87■■□□□ 1.25
SHOX2-201ENST00000389589 TUBA3EQ6PEY2 450 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 JAZF1Q86VZ6 243 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 ADGRG3Q86Y34 549 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 PMEPA1Q969W9 287 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 KCTD7Q96MP8 289 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 CNN2Q99439 309 aaKnown RBP22.87■■□□□ 1.25
SHOX2-201ENST00000389589 TIMP4Q99727 224 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 NUAK2Q9H093 628 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 ZNF700Q9H0M5 742 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 ISG20L2Q9H9L3 353 aaKnown RBP22.87■■□□□ 1.25
SHOX2-201ENST00000389589 TRIM36Q9NQ86 728 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 NOX1Q9Y5S8 564 aa22.87■■□□□ 1.25
SHOX2-201ENST00000389589 A0A075B6Q4 140 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 TEX13CA0A0J9YWL9 993 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms