RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 IFNA16P05015 189 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 APEHP13798 732 aaKnown RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 SPI1P17947 270 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 RPS11P62280 158 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 GPR176Q14439 515 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 CEP78Q5JTW2 689 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 IL20RBQ6UXL0 311 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 RPS4Y2Q8TD47 263 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 SNX33Q8WV41 574 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 SLC38A3Q99624 504 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 UBQLN4Q9NRR5 601 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 NCDNQ9UBB6 729 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 TMEM184BQ9Y519 407 aaPredicted RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.67□□□□□ -0.22
SCFD2-201ENST00000388940 OR6C68A6NDL8 312 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 LRRN3E7EW58 273 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 GPRIN2O60269 458 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 ZNF217O75362 1048 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 TFPIP10646 304 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 SIGIRRQ6IA17 410 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 ATG4DQ86TL0 474 aaPredicted RBP13.67□□□□□ -0.22
SCFD2-201ENST00000388940 GPR135Q8IZ08 494 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 ASCC1Q8N9N2 400 aaKnown RBP13.67□□□□□ -0.22
SCFD2-201ENST00000388940 ZNF527Q8NB42 609 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 OR13C5Q8NGS8 318 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 ZNRF4Q8WWF5 429 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 CMTM3Q96MX0 182 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 LRRN3Q9H3W5 708 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 KLHL1Q9NR64 748 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 EPHA6Q9UF33 1036 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 HIF3AQ9Y2N7 669 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 SLC6A5Q9Y345 797 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 IGHV1OR15-9A0A0B4J2B8 117 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 INMT-MINDY4F8WBC2 141 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 LANCL1O43813 399 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 GLCEO94923 617 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 IL33O95760 270 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 PAHP00439 452 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 WNT1P04628 370 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 EPXP11678 715 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 CD1CP29017 333 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 NAA10P41227 235 aaPredicted RBP13.67□□□□□ -0.22
SCFD2-201ENST00000388940 GRK6P43250 576 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 PPICP45877 212 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 CD83Q01151 205 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 PLA1AQ53H76 456 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 BICRALQ6AI39 1079 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 OR51L1Q8NGJ5 315 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 ABHD1Q96SE0 405 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 RAB33BQ9H082 229 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 PDE7BQ9NP56 450 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
SCFD2-201ENST00000388940 COPS3Q9UNS2 423 aa13.67□□□□□ -0.22
SCFD2-201ENST00000388940 EML5Q05BV3 1969 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 TRBV2A0A0J9YWF9 115 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 A0A1W2PR77 199 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ELOA3DA6NLF2 546 aaPredicted RBP13.66□□□□□ -0.22
SCFD2-201ENST00000388940 IMPA2O14732 288 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 FLRT2O43155 660 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 TMEM127O75204 238 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ARSBP15848 533 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ERP29P30040 261 aaKnown RBP13.66□□□□□ -0.22
SCFD2-201ENST00000388940 AGFG1P52594 562 aaKnown RBP13.66□□□□□ -0.22
SCFD2-201ENST00000388940 SLC25A1P53007 311 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 SKP2Q13309 424 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ZNF74Q16587 644 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ELOA3BQ3SY89 546 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 WDR45BQ5MNZ6 344 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 BAIAP2L2Q6UXY1 529 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 NUP54Q7Z3B4 507 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 LRRC75AQ8NAA5 344 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ELOA3Q8NG57 546 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 HAVCR2Q8TDQ0 301 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
SCFD2-201ENST00000388940 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 GNG8Q9UK08 70 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 GMEB2Q9UKD1 530 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 MMACHCQ9Y4U1 282 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
SCFD2-201ENST00000388940 IGHV5-51A0A0C4DH38 117 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 A0A1B0GTQ1 180 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 LOC105371267A0A1B0GV96 52 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 C17orf105B2RV13 164 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 MAGEB4O15481 346 aaPredicted RBP13.66□□□□□ -0.22
SCFD2-201ENST00000388940 UBL3O95164 117 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ATF1P18846 271 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 CD27P26842 260 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 MMP15P51511 669 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 SLC37A1P57057 533 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 RAB25P57735 213 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
SCFD2-201ENST00000388940 ERVK-25P63136 954 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 PITPNAQ00169 270 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 GRM7Q14831 915 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 LINC01590Q5TEZ4 76 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 YIPF7Q8N8F6 280 aa13.66□□□□□ -0.22
SCFD2-201ENST00000388940 LMX1AQ8TE12 382 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms