RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 DHRS9Q9BPW9 319 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 SLC17A5Q9NRA2 495 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 NKIRAS1Q9NYS0 192 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 ATP23Q9Y6H3 246 aa12.41□□□□□ -0.42
SHOX-202ENST00000381575 AQP7P3A6NL99 342 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 KLF11O14901 512 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 UBDO15205 165 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 GPRIN2O60269 458 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 CRLF1O75462 422 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 GPIP06744 558 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 TFPTP0C1Z6 253 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 NCF2P19878 526 aaPredicted RBP12.4□□□□□ -0.42
SHOX-202ENST00000381575 FABP6P51161 128 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 POLR2JP52435 117 aaKnown RBP12.4□□□□□ -0.42
SHOX-202ENST00000381575 CRISP3P54108 245 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 TXNL4AP83876 142 aaKnown RBP12.4□□□□□ -0.42
SHOX-202ENST00000381575 LRRC74AQ0VAA2 488 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 WBP2NLQ6ICG8 309 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 AAED1Q7RTV5 226 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 CROCCP2Q86T23 111 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 ZNF440Q8IYI8 595 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 FBXL14Q8N1E6 418 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 MUC15Q8N387 334 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 TLCD1Q96CP7 247 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 ITCHQ96J02 903 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 SDR39U1Q9NRG7 319 aaPredicted RBP12.4□□□□□ -0.42
SHOX-202ENST00000381575 YAE1D1Q9NRH1 226 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 CBLN4Q9NTU7 201 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 ZIM2Q9NZV7 527 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 DCTN4Q9UJW0 460 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 MGAT4BQ9UQ53 548 aa12.4□□□□□ -0.42
SHOX-202ENST00000381575 ATP6V1G2-DDX39BF2Z307 99 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 SLCO1B7G3V0H7 640 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 LY6HO94772 140 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 TP53P04637 393 aaPredicted RBP12.39□□□□□ -0.43
SHOX-202ENST00000381575 MPGP29372 298 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 SELENOPP49908 381 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 P2RY4P51582 365 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 COPZ1P61923 177 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 TUBA1BP68363 451 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 TUBA4AP68366 448 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 GSTA3Q16772 222 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 RNF220Q5VTB9 566 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 C1orf140Q5VVS0 124 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 TUBA1AQ71U36 451 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 KDM8Q8N371 416 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 ZNF525Q8N782 197 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 TMEM45BQ96B21 275 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 C3orf49Q96BT1 292 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
SHOX-202ENST00000381575 ALKBH3Q96Q83 286 aaPredicted RBP12.39□□□□□ -0.43
SHOX-202ENST00000381575 TAPBPLQ9BX59 468 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
SHOX-202ENST00000381575 RMND5AQ9H871 391 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 BARX1Q9HBU1 254 aaPredicted RBP12.39□□□□□ -0.43
SHOX-202ENST00000381575 TMBIM4Q9HC24 238 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 PARPBPQ9NWS1 579 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 CALML5Q9NZT1 146 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 SEC14L4Q9UDX3 406 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 PCDHB14Q9Y5E9 798 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 FBN3Q75N90 2809 aa12.39□□□□□ -0.43
SHOX-202ENST00000381575 SVEP1Q4LDE5 3571 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 FAM234BA2RU67 622 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 LGI1O95970 557 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 ZCCHC18P0CG32 403 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 LARS2Q15031 903 aaKnown RBP12.38□□□□□ -0.43
SHOX-202ENST00000381575 ZNF311Q5JNZ3 666 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 PRAMEF8Q5VWM4 474 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 PRAMEF7Q5VXH5 474 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 LINGO2Q7L985 606 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 SSX8Q7RTT4 187 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 COMTD1Q86VU5 262 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 MIER2Q8N344 545 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 GTF2H4Q92759 462 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 SLC25A36Q96CQ1 311 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 SPATA9Q9BWV2 254 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 RSPO3Q9BXY4 272 aaPredicted RBP12.38□□□□□ -0.43
SHOX-202ENST00000381575 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 MOKQ9UQ07 419 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 AMDHD2Q9Y303 409 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
SHOX-202ENST00000381575 A0A096LNT2 108 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 A8MVM7 634 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 TMEM229AB2RXF0 380 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 CLIC1O00299 241 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 NR5A2O00482 541 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 CD5LO43866 347 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 KRT33AO76009 404 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 RPS5P46782 204 aaKnown RBP12.37□□□□□ -0.43
SHOX-202ENST00000381575 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 RGNQ15493 299 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 NRF1Q16656 503 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 TMEM225Q6GV28 225 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 NIPAL3Q6P499 406 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 KLHL24Q6TFL4 600 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 CLEC2AQ6UVW9 174 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 MSANTD1Q6ZTZ1 278 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms