RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CMTM4Q8IZR5 234 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 OR2T35Q8NGX2 323 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 ZPLD1Q8TCW7 415 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 WDR89Q96FK6 387 aaPredicted RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SCARF2Q96GP6 870 aaPredicted RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 ERMAPQ96PL5 475 aaPredicted RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SPRTNQ9H040 489 aaPredicted RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 C20orf85Q9H1P6 137 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 FKRPQ9H9S5 495 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 GNG8Q9UK08 70 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF346Q9UL40 294 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 ALPK2Q86TB3 2170 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 RPS10-NUDT3A0A1W2PQS6 291 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 ACOD1A6NK06 481 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 C2orf74A8MZ97 194 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 PTP4A3O75365 173 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SERPINI2O75830 405 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 DBIP07108 87 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 EMDP50402 254 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 FHL5Q5TD97 284 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 LINGO2Q7L985 606 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 ADAMTS14Q8WXS8 1223 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 OMA1Q96E52 524 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SORCS2Q96PQ0 1159 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 C1QTNF6Q9BXI9 259 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 POT1Q9NUX5 634 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 LINC00862A6NCI5 91 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 PDGFAP04085 211 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SULT1A3P0DMM9 295 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SULT1A4P0DMN0 295 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 TSFMP43897 325 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 VEGFCP49767 419 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 PGDP52209 483 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SNTA1Q13424 505 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 GLRX5Q86SX6 157 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 FAM98AQ8NCA5 519 aaKnown RBP14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 GFI1Q99684 422 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 OR10A4Q9H209 315 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 INPP5EQ9NRR6 644 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 ANKRD10Q9NXR5 420 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 COPS3Q9UNS2 423 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 SPACA6W5XKT8 324 aa14.93□□□□□ -0.02
NKX3-1-201ENST00000380871 MEIKINA0A087WXM9 373 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 A0A1B0GWA3 101 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 FAM171A2A8MVW0 826 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 GMFGO60234 142 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 AP2S1P53680 142 aaPredicted RBP14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 CDK5R1Q15078 307 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 NDUFAF6Q330K2 333 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 RNF113BQ8IZP6 322 aaKnown RBP14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 OR11G2Q8NGC1 345 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 OR4N2Q8NGD1 307 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 RBP7Q96R05 134 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 KLK11Q9UBX7 282 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 PPIEQ9UNP9 301 aaKnown RBP14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 C19orf53Q9UNZ5 99 aaPredicted RBP14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 SPEF1Q9Y4P9 236 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 SLC22A7Q9Y694 548 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 CABIN1Q9Y6J0 2220 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 ANKRD61A6NGH8 418 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 SELENOFO60613 162 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 SDC3O75056 442 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 NUDT1P36639 197 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 TAS2R43P59537 309 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 COMMD7Q86VX2 200 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 OR2T4Q8NH00 348 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 LRRC20Q8TCA0 184 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 SMIM19Q96E16 107 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 MSANTD3Q96H12 275 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 SCML1Q9UN30 329 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 NPFFR2Q9Y5X5 522 aa14.92□□□□□ -0.02
NKX3-1-201ENST00000380871 TRBV2A0A0J9YWF9 115 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 A6NCN8 305 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 HRKO00198 91 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 SHOXO15266 292 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 AGR2O95994 175 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 RPS15P62841 145 aaKnown RBP14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 FAM53BQ14153 422 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 BTN2A1Q7KYR7 527 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF433Q8N7K0 673 aaPredicted RBP14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 DNAJA3Q96EY1 480 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 DDOQ99489 341 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 NOX4Q9NPH5 578 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 MCIDASD6RGH6 385 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 PIN1P1O15428 100 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 IGHV4-34P06331 123 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF10P21506 573 aaPredicted RBP14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 MRPS21P82921 87 aaKnown RBP14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 EIF2B5Q13144 721 aaKnown RBP14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 GPR139Q6DWJ6 353 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 NLRC3Q7RTR2 1065 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 SEC22CQ9BRL7 303 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 H3BSH0 61 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 EDNRAP25101 427 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 TRAM1Q15629 374 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 FTMTQ8N4E7 242 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 OR52I2Q8NH67 350 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 SNX33Q8WV41 574 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 HGDQ93099 445 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 IER3IP1Q9Y5U9 82 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms