RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 PRAMEF7Q5VXH5 474 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 OR7E24Q6IFN5 339 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.9□□□□□ -1.791e-7■■■■□ 22
BRCA2-201ENST00000380152 OR13C2Q8NGS9 318 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 OR4Q3Q8NH05 313 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 HAS2Q92819 552 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 KLHL15Q96M94 604 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ZNF587Q96SQ5 575 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SSX3Q99909 188 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ARPC5LQ9BPX5 153 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 TMEM43Q9BTV4 400 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 CDCA4Q9BXL8 241 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 FN3KQ9H479 309 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 EMC7Q9NPA0 242 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 WASH6PQ9NQA3 447 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PLCXD1Q9NUJ7 323 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 LCTP09848 1927 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 D6RAR5 112 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 NPIPA2E9PIF3 369 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 NPIPA3F8WFD2 350 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 KIAA0355O15063 1070 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 NSA2O95478 260 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SLC2A10O95528 541 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PCMT1P22061 227 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 MSX1P28360 303 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PPT1P50897 306 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SUOXP51687 545 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 UBE2MP61081 183 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 RSU1Q15404 277 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 C3orf38Q5JPI3 329 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 LRIF1Q5T3J3 769 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 DPY19L4Q7Z388 723 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SLAIN1Q8ND83 568 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 MALSU1Q96EH3 234 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 KLF16Q9BXK1 252 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 GLIPR2Q9H4G4 154 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ZNF223Q9UK11 482 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SLC7A11Q9UPY5 501 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PRKRAO75569 313 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SLC34A2O95436 690 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ADH1BP00325 375 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 KLKB1P03952 638 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 CBR1P16152 277 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 HIST1H1TP22492 207 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 KCNJ5P48544 419 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 HHEXQ03014 270 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 LTB4RQ15722 352 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 CST6Q15828 149 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 CD276Q5ZPR3 534 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 OR10K2Q6IF99 312 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SLC35D2Q76EJ3 337 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 COX15Q7KZN9 410 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 GRAMD2AQ8IUY3 354 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ZNF695Q8IW36 515 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 FRMD1Q8N878 549 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 OR52E1Q8NGJ3 308 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 OR4C15Q8NGM1 316 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 TEAD3Q99594 435 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SGK494L7N484 410 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ETHE1O95571 254 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 HOXC12P31275 282 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SNU13P55769 128 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 EBPQ15125 230 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 YIF1BQ5BJH7 314 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PDZD11Q5EBL8 140 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 TMEM71Q6P5X7 295 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 TMEM156Q8N614 296 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 OR52R1Q8NGF1 315 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 CHTF18Q8WVB6 975 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ISG20Q96AZ6 181 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 NEURL3Q96EH8 262 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PARP12Q9H0J9 701 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 DNTTIP1Q9H147 329 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 HCSTQ9UBK5 93 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 EMC9Q9Y3B6 208 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PUS1Q9Y606 427 aaKnown RBP eCLIP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 MN1Q10571 1320 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 TTLL8A6PVC2 850 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 STK17BO94768 372 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 UBL4AP11441 157 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 IFNGR1P15260 489 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 GABRR1P24046 479 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 PDX1P52945 283 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SNRPGP62308 76 aaKnown RBP3.9□□□□□ -1.79
BRCA2-201ENST00000380152 GPR176Q14439 515 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 MEF2DQ14814 521 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ADAM5Q6NVV9 412 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 TMUB2Q71RG4 321 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 NKAIN4Q8IVV8 208 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 OR51D1Q8NGF3 324 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ST8SIA4Q92187 359 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 TANKQ92844 425 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 C3orf49Q96BT1 292 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SGCZQ96LD1 299 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 C10orf90Q96M02 699 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 SYT17Q9BSW7 474 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ULBP3Q9BZM4 244 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 R3HDMLQ9H3Y0 253 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 CWH43Q9H720 699 aa3.9□□□□□ -1.79
BRCA2-201ENST00000380152 ASB6Q9NWX5 421 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms