RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 GRAMD1BQ3KR37 738 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 Q5PR19 223 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 CLEC9AQ6UXN8 241 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 HMGN2P46Q86SG4 172 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 CYP4Z1Q86W10 505 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 SVOPLQ8N434 492 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 OR4D11Q8NGI4 311 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 OR4C3Q8NH37 302 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 C9orf16Q9BUW7 83 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 PRRG4Q9BZD6 226 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 POLR2J2Q9GZM3 115 aaKnown RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 POLR2J3Q9H1A7 115 aaKnown RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 MRPS18CQ9Y3D5 142 aaKnown RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF469Q96JG9 3925 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 A0A1W2PPR1 153 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 H0YC42 278 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 M0R3H8 397 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 SCDO00767 359 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 FMO6PO60774 539 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 INHBBP09529 407 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 TPD52P55327 224 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 RGS8P57771 180 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 B3GALT5-AS1P59052 145 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 PON3Q15166 354 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 EXOC3L2Q2M3D2 409 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF550Q7Z398 422 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 BTLAQ7Z6A9 289 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 MARCH3Q86UD3 253 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 FADS6Q8N9I5 356 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 ICA1LQ8NDH6 482 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 FAM71CQ8NEG0 241 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 OR6T1Q8NGN1 323 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 OR5K1Q8NHB7 308 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 VANGL1Q8TAA9 524 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 FNDC9Q8TBE3 224 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 RNF138Q8WVD3 245 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 EME1Q96AY2 570 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 STARD4Q96DR4 205 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 PRRC1Q96M27 445 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 CCL19Q99731 98 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 PIP5K1AQ99755 562 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 WFDC6Q9BQY6 131 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 PIGQQ9BRB3 760 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 KLHL4Q9C0H6 718 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 REEP1Q9H902 201 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF337Q9Y3M9 751 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 OR2M5A3KFT3 312 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 CLDN24A6NM45 220 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 PLGP00747 810 aaPredicted RBP12.3□□□□□ -0.44
PRPF18-202ENST00000378572 HPGDP15428 266 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 FPR1P21462 350 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 HMGA2P52926 109 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 PLAURQ03405 335 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 NPTX1Q15818 432 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 LPCAT4Q643R3 524 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF440Q8IYI8 595 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 PACRGLQ8N7B6 248 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 DUSP19Q8WTR2 217 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 WFIKKN1Q96NZ8 548 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 EPYCQ99645 322 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 OSBPL10Q9BXB5 764 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 EXOSC3Q9NQT5 275 aaKnown RBP12.3□□□□□ -0.44
PRPF18-202ENST00000378572 RLIMQ9NVW2 624 aa12.3□□□□□ -0.44
PRPF18-202ENST00000378572 TESQ9UGI8 421 aaKnown RBP12.3□□□□□ -0.44
PRPF18-202ENST00000378572 B4DXG7 233 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 SHISA8B8ZZ34 492 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 H3BNH8 94 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 AP3D1O14617 1153 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 FADS1O60427 444 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 DIRAS1O95057 198 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 FCGR2AP12318 317 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 HOXC12P31275 282 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 RRM2P31350 389 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 CLDN20P56880 219 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 SMIM11AP58511 58 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 SHQ1Q6PI26 577 aaKnown RBP12.29□□□□□ -0.44
PRPF18-202ENST00000378572 DEF8Q6ZN54 512 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 RANBP3LQ86VV4 465 aaPredicted RBP12.29□□□□□ -0.44
PRPF18-202ENST00000378572 HIPK1Q86Z02 1210 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 RBM45Q8IUH3 476 aaKnown RBP12.29□□□□□ -0.44
PRPF18-202ENST00000378572 ZDHHC13Q8IUH4 622 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 EPHX4Q8IUS5 362 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 OFCC1Q8IZS5 231 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF614Q8N883 585 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 PIK3C3Q8NEB9 887 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 PIGTQ969N2 578 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 C1GALT1C1Q96EU7 318 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 PERPQ96FX8 193 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 VCXQ9H320 206 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 VNN3Q9NY84 501 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 OAZ3Q9UMX2 235 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 VDAC3Q9Y277 283 aa12.29□□□□□ -0.44
PRPF18-202ENST00000378572 SAMHD1Q9Y3Z3 626 aaKnown RBP12.29□□□□□ -0.44
PRPF18-202ENST00000378572 LYVE1Q9Y5Y7 322 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms