RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 FUT5Q11128 374 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 ST3GAL3Q11203 375 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 ZNF169Q14929 603 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 EXT1Q16394 746 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 SNAPC1Q16533 368 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 GLYR1Q49A26 553 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 ARMC4Q5T2S8 1044 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 SLC48A1Q6P1K1 146 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 CD200R1LQ6Q8B3 271 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 OR8H2Q8N162 312 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 CLIP4Q8N3C7 705 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 OR5D16Q8NGK9 328 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 GPR151Q8TDV0 419 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 HAS2Q92819 552 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 UFD1Q92890 307 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 SNTG1Q9NSN8 517 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 SLC13A4Q9UKG4 626 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 GSTK1Q9Y2Q3 226 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 CYP7B1O75881 506 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 NEURL1O76050 574 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 CLPSP04118 112 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 IFNA16P05015 189 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 IL7P13232 177 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 ZNF10P21506 573 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 CFL1P23528 166 aaKnown RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 FPR3P25089 353 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 MPIP34949 423 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 ETV1P50549 477 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 TAS2R41P59536 307 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 ZNF79Q15937 498 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 ACSM5Q6NUN0 579 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 METAP1DQ6UB28 335 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 COMTD1Q86VU5 262 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 SAMD14Q8IZD0 417 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 IQCF1Q8N6M8 205 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 PIGXQ8TBF5 258 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 DIO2Q92813 273 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 OSTF1Q92882 214 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 WFDC6Q9BQY6 131 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 SLC22A4Q9H015 551 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 TP63Q9H3D4 680 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 ERVK13-1Q9NX77 482 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 KLHL28Q9NXS3 571 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 NTMQ9P121 344 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 CES1P1Q9UKY3 287 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 PPIEQ9UNP9 301 aaKnown RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 A0A087WUU8 490 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 TRDV1A0A1B0GX56 115 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 DUXAA6NLW8 204 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 CENPXA8MT69 81 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 C17orf105B2RV13 164 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 CLDN4O14493 209 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 CDRT1O95170 752 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 CT62P0C5K7 136 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 ICAM2P13598 275 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 ZNF24P17028 368 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 BUD31P41223 144 aaPredicted RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 MTNR1AP48039 350 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 MLF1P58340 268 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 STX4Q12846 297 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 DECR1Q16698 335 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 ABHD17BQ5VST6 288 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 WDR53Q7Z5U6 358 aaPredicted RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 RPS19BP1Q86WX3 136 aaKnown RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 LAX1Q8IWV1 398 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 CELF2-AS1Q8N7Q2 184 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 POGLUT1Q8NBL1 392 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 MDS2Q8NDY4 140 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 SLC2A12Q8TD20 617 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 GRHL3Q8TE85 626 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 ZNF721Q8TF20 911 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 OTUB1Q96FW1 271 aaPredicted RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 TRMT61AQ96FX7 289 aaKnown RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 OR8D2Q9GZM6 311 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 SAP130Q9H0E3 1048 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 ANKRA2Q9H9E1 313 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 ADAP2Q9NPF8 381 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 KRCC1Q9NPI7 259 aaPredicted RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 KLHL1Q9NR64 748 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 SF3B6Q9Y3B4 125 aaKnown RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 N6AMT1Q9Y5N5 214 aa11.28□□□□□ -0.6
VRK3-202ENST00000377011 SPIN1Q9Y657 262 aaPredicted RBP11.28□□□□□ -0.6
VRK3-202ENST00000377011 OR5H15A6NDH6 313 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 HCN1O60741 890 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 OR5F1O95221 314 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 MST1P26927 711 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 NR4A2P43354 598 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 PPP3R1P63098 170 aa11.27□□□□□ -0.61
VRK3-202ENST00000377011 LASP1Q14847 261 aaKnown RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 ELAVL1Q15717 326 aaKnown RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 EIF2S3LQ2VIR3 472 aaKnown RBP11.27□□□□□ -0.61
VRK3-202ENST00000377011 GPAT3Q53EU6 434 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms