RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 ATP6V1E1P36543 226 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 HPCAL1P37235 193 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 GABRA4P48169 554 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ATP4BP51164 291 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 MMP15P51511 669 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 MLLT10P55197 1068 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 C21orf58P58505 322 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ISL1P61371 349 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 TRA2BP62995 288 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 RPL38P63173 70 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 GABPB1Q06547 395 aaPredicted RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 C2orf80Q0P641 193 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 SLAMF1Q13291 335 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 FAM53BQ14153 422 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 SQLEQ14534 574 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 C16orf72Q14CZ0 275 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 HEPACAMQ14CZ8 416 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 HKDC1Q2TB90 917 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 DEFB110Q30KQ9 67 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 FAM174BQ3ZCQ3 159 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 DEFB134Q4QY38 66 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 RFTN2Q52LD8 501 aaPredicted RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 NDUFAF5Q5TEU4 345 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 HES3Q5TGS1 186 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ADNP2Q6IQ32 1131 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 CGB2Q6NT52 195 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 PRMT9Q6P2P2 845 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 COMMD6Q7Z4G1 85 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 TMEM126BQ8IUX1 230 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ODF3L1Q8IXM7 274 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 CLIP4Q8N3C7 705 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ZCCHC7Q8N3Z6 543 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 LIX1Q8N485 282 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ACOT4Q8N9L9 421 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 OR2T11Q8NH01 316 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 OR1L3Q8NH93 324 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 WDR36Q8NI36 951 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 C10orf82Q8WW14 230 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 SSMEM1Q8WWF3 244 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 STARD8Q92502 1023 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 NSMAFQ92636 917 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ST6GALNAC6Q969X2 333 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ZNF501Q96CX3 271 aaPredicted RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 SCMH1Q96GD3 660 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 ZNF285Q96NJ3 590 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 CATSPER2Q96P56 530 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 EBF4Q9BQW3 602 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 C1orf50Q9BV19 199 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 DPY30Q9C005 99 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 TMPRSS5Q9H3S3 457 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 DDX31Q9H8H2 851 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 WDR41Q9HAD4 459 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 CDH20Q9HBT6 801 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 CUTCQ9NTM9 273 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 OCIAD1Q9NX40 245 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 LYARQ9NX58 379 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 MS4A12Q9NXJ0 267 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 PHF11Q9UIL8 331 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 FBXW2Q9UKT8 454 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 PSME2Q9UL46 239 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 MRPS33Q9Y291 106 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 NAALAD2Q9Y3Q0 740 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 POLR3HQ9Y535 204 aaPredicted RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 ANKRD12Q6UB98 2062 aa5.01□□□□□ -1.61
SSX3-203ENST00000376895 RIF1Q5UIP0 2472 aaKnown RBP5.01□□□□□ -1.61
SSX3-203ENST00000376895 TMEM131Q92545 1883 aa5□□□□□ -1.61
SSX3-203ENST00000376895 VPS13AQ96RL7 3174 aa5□□□□□ -1.61
SSX3-203ENST00000376895 A0A0A6YYC8 382 aaPredicted RBP5□□□□□ -1.61
SSX3-203ENST00000376895 A0A0G2JN53 185 aa5□□□□□ -1.61
SSX3-203ENST00000376895 A0A1B0GX78 115 aa5□□□□□ -1.61
SSX3-203ENST00000376895 C5orf52A6NGY3 159 aa5□□□□□ -1.61
SSX3-203ENST00000376895 H0YIG0 161 aa5□□□□□ -1.61
SSX3-203ENST00000376895 I3L1I5 382 aaPredicted RBP5□□□□□ -1.61
SSX3-203ENST00000376895 SGK494L7N484 410 aa5□□□□□ -1.61
SSX3-203ENST00000376895 RTCAO00442 366 aaKnown RBP5□□□□□ -1.61
SSX3-203ENST00000376895 CASC3O15234 703 aaKnown RBP5□□□□□ -1.61
SSX3-203ENST00000376895 SLC22A2O15244 555 aa5□□□□□ -1.61
SSX3-203ENST00000376895 P2RX6O15547 441 aa5□□□□□ -1.61
SSX3-203ENST00000376895 HCRTR1O43613 425 aa5□□□□□ -1.61
SSX3-203ENST00000376895 GALR3O60755 368 aaPredicted RBP5□□□□□ -1.61
SSX3-203ENST00000376895 NSA2O95478 260 aaKnown RBP5□□□□□ -1.61
SSX3-203ENST00000376895 TBX6O95947 436 aaPredicted RBP5□□□□□ -1.61
SSX3-203ENST00000376895 CSN3P07498 182 aa5□□□□□ -1.61
SSX3-203ENST00000376895 SMIM10L1P0DMW3 83 aa5□□□□□ -1.61
SSX3-203ENST00000376895 CCL4P13236 92 aa5□□□□□ -1.61
SSX3-203ENST00000376895 RNH1P13489 461 aaKnown RBP5□□□□□ -1.61
SSX3-203ENST00000376895 ITGA2P17301 1181 aa5□□□□□ -1.61
SSX3-203ENST00000376895 IL1RNP18510 177 aa5□□□□□ -1.61
SSX3-203ENST00000376895 FBLP22087 321 aaKnown RBP5□□□□□ -1.61
SSX3-203ENST00000376895 IL10P22301 178 aa5□□□□□ -1.61
SSX3-203ENST00000376895 CPN2P22792 545 aa5□□□□□ -1.61
SSX3-203ENST00000376895 WNT5AP41221 380 aa5□□□□□ -1.61
SSX3-203ENST00000376895 MNAT1P51948 309 aa5□□□□□ -1.61
SSX3-203ENST00000376895 DIO3P55073 304 aa5□□□□□ -1.61
SSX3-203ENST00000376895 NME5P56597 212 aa5□□□□□ -1.61
SSX3-203ENST00000376895 CLDN8P56748 225 aa5□□□□□ -1.61
SSX3-203ENST00000376895 NANOS3P60323 173 aaKnown RBP5□□□□□ -1.61
SSX3-203ENST00000376895 SEC61A1P61619 476 aaKnown RBP5□□□□□ -1.61
SSX3-203ENST00000376895 EEF1A1P68104 462 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms