RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ELOA3Q8NG57 546 aa17.72■□□□□ 0.43
TMEM53-205ENST00000372244 RCN3Q96D15 328 aa17.72■□□□□ 0.43
TMEM53-205ENST00000372244 SF3B5Q9BWJ5 86 aaKnown RBP17.72■□□□□ 0.43
TMEM53-205ENST00000372244 TMEM27Q9HBJ8 222 aa17.72■□□□□ 0.43
TMEM53-205ENST00000372244 C6orf203Q9P0P8 240 aaPredicted RBP17.72■□□□□ 0.43
TMEM53-205ENST00000372244 SLC13A4Q9UKG4 626 aa17.72■□□□□ 0.43
TMEM53-205ENST00000372244 FLVCR1Q9Y5Y0 555 aa17.72■□□□□ 0.43
TMEM53-205ENST00000372244 IGKV1D-42A0A075B6H8 117 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 A0A087WUJ7 227 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 A0A0B4J2E0 115 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 A0A1B0GX12 115 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 GMNCA6NCL1 334 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 KLF4O43474 513 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 SNX3O60493 162 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 LOXP28300 417 aaPredicted RBP17.71■□□□□ 0.43
TMEM53-205ENST00000372244 GYS2P54840 703 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 TESK1Q15569 626 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 ALG10BQ5I7T1 473 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 OTUD3Q5T2D3 398 aaPredicted RBP17.71■□□□□ 0.43
TMEM53-205ENST00000372244 ZNF100Q8IYN0 542 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 ZIC4Q8N9L1 334 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 KTI12Q96EK9 354 aaPredicted RBP17.71■□□□□ 0.43
TMEM53-205ENST00000372244 SLC47A1Q96FL8 570 aa17.71■□□□□ 0.43
TMEM53-205ENST00000372244 ZC3HAV1LQ96H79 300 aaKnown RBP17.71■□□□□ 0.43
TMEM53-205ENST00000372244 USB1Q9BQ65 265 aaKnown RBP17.71■□□□□ 0.43
TMEM53-205ENST00000372244 NPTX1Q15818 432 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 FBXW9Q5XUX1 488 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 FBXW10Q5XX13 1052 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 ERICH5Q6P6B1 374 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 C5orf46Q6UWT4 87 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 RANBP3LQ86VV4 465 aaPredicted RBP17.7■□□□□ 0.42
TMEM53-205ENST00000372244 OR6T1Q8NGN1 323 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 NINJ1Q92982 152 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 TAAR8Q969N4 342 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 S100PBPQ96BU1 408 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 TAPBPLQ9BX59 468 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 PARPBPQ9NWS1 579 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 ADPRHL2Q9NX46 363 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 ST6GALNAC2Q9UJ37 374 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 USP22Q9UPT9 525 aa17.7■□□□□ 0.42
TMEM53-205ENST00000372244 OR2T1O43869 369 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 MRPL33O75394 65 aaKnown RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 VAMP5O95183 116 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 COX5AP20674 150 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 CDH12P55289 794 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 POU4F3Q15319 338 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 TSC22D1Q15714 1073 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 SWT1Q5T5J6 900 aaKnown RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 C8orf82Q6P1X6 216 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 LINC00114Q6XXX2 140 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 LURAP1LQ8IV03 231 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 OR9K2Q8NGE7 335 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 OR4D11Q8NGI4 311 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 RASSF5Q8WWW0 418 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 HSD17B8Q92506 261 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 KISS1RQ969F8 398 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 APH1AQ96BI3 265 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 MCHR1Q99705 422 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 EFCAB1Q9HAE3 211 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 CMTM6Q9NX76 183 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 SLC9A8Q9Y2E8 581 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 M0R3H8 397 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 DYNC1I1O14576 645 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 AHSA1O95433 338 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 IGHV1-2P23083 117 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 RPS5P46782 204 aaKnown RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 NCALDP61601 193 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 TMEM225Q6GV28 225 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 ZNF613Q6PF04 617 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 CPLX4Q7Z7G2 160 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 RBM45Q8IUH3 476 aaKnown RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 SLC15A3Q8IY34 581 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 TMEM45BQ96B21 275 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 HOPXQ9BPY8 73 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-205ENST00000372244 FAM107BQ9H098 131 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 PCDHAC1Q9H158 963 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 EDARQ9UNE0 448 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 AP3M1Q9Y2T2 418 aa17.69■□□□□ 0.42
TMEM53-205ENST00000372244 CCT8L1PA6NM43 557 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 PDLIM1O00151 329 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 AIM2O14862 343 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 IL32P24001 234 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 IST1P53990 364 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 FAM69AQ5T7M9 428 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 HACD2Q6Y1H2 254 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 BHLHA15Q7RTS1 189 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-205ENST00000372244 PIGWQ7Z7B1 504 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 ZNF433Q8N7K0 673 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-205ENST00000372244 OR6S1Q8NH40 331 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 SLC26A7Q8TE54 656 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 PIK3IP1Q96FE7 263 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 SELENONQ9NZV5 590 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 MALT1Q9UDY8 824 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 RASD1Q9Y272 281 aa17.68■□□□□ 0.42
TMEM53-205ENST00000372244 MAP1AP78559 2803 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-205ENST00000372244 ALPK2Q86TB3 2170 aa17.67■□□□□ 0.42
TMEM53-205ENST00000372244 TRAV36DV7A0A075B6V5 113 aa17.67■□□□□ 0.42
TMEM53-205ENST00000372244 FAM220BPB1ANY3 271 aa17.67■□□□□ 0.42
TMEM53-205ENST00000372244 LYZL6O75951 148 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms