RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF611Q8N823 705 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR5H2Q8NGV7 314 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 HAVCR2Q8TDQ0 301 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 TCEAL2Q9H3H9 227 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 ATXN7L1Q9ULK2 861 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 ERV3-1Q14264 604 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR4K13Q8NH42 304 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 HOXB13Q92826 284 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SAMD8Q96LT4 415 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 TMEM121BQ9BXQ6 578 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 VDAC3Q9Y277 283 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 DIRAS3O95661 229 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SNRNP70P08621 437 aaKnown RBP12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SDC1P18827 310 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 RPS5P46782 204 aaKnown RBP12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 GPR18Q14330 331 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 TMEM201Q5SNT2 666 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 OPN5Q6U736 354 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 TEX261Q6UWH6 196 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 TMEM150AQ86TG1 271 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF595Q8IYB9 648 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SFXN5Q8TD22 340 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 U3KQ87 197 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SSC5DA1L4H1 1573 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 RAB38P57729 211 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 C3P1Q6ZMU1 363 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 FAM185AQ8N0U4 392 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR14A16Q8NHC5 309 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC35A3Q9Y2D2 325 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 ANKRD28O15084 1053 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 CLN5O75503 358 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR8U9P0C7N5 309 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 CPMP14384 443 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 TAS2R31P59538 309 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 GRB2P62993 217 aaKnown RBP12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 PRAMEF8Q5VWM4 474 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 PRAMEF7Q5VXH5 474 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF534Q76KX8 674 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 CHTF18Q8WVB6 975 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 CDS1Q92903 461 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 PINK1Q9BXM7 581 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SEMA6CQ9H3T2 930 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 CBLCQ9ULV8 474 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC6A14Q9UN76 642 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 PCDHA9Q9Y5H5 950 aa12.41□□□□□ -0.42
RAPGEF1-201ENST00000372189 DOCK1Q14185 1865 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 A0A1W2PQ09 198 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 EXOSC7Q15024 291 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 IL17RCQ8NAC3 791 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 DCUN1D4Q92564 292 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 SIPA1L3O60292 1781 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 ADAM11O75078 769 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 PRDX3P30048 256 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 SSTR4P31391 388 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 ECH1Q13011 328 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 PPA1Q15181 289 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 DPY19L2P1Q6NXN4 242 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 SPRYD4Q8WW59 207 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 TMPRSS11EQ9UL52 423 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 MEGF11A6BM72 1044 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 A6NLC8 198 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 A8MXE2 369 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 H0YIV9 168 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 GATCO43716 136 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 GPR75O95800 540 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 TFAP2AP05549 437 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 TNFSF8P32971 234 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 CASP3P42574 277 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 DCAF7P61962 342 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 BCL7AQ4VC05 210 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 HPSE2Q8WWQ2 592 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 FOXQ1Q9C009 403 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 CDH20Q9HBT6 801 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 KCNJ16Q9NPI9 418 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 ING1Q9UK53 422 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 NXT1Q9UKK6 140 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC7A7Q9UM01 511 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 BOKQ9UMX3 212 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 ATG4BQ9Y4P1 393 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 KCNK5O95279 499 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 IL1AP01583 271 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC2A1P11166 492 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 HTR3AP46098 478 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 CTXN1P60606 82 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 DMWDQ09019 674 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 SYNPO2LQ9H987 977 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLAMF7Q9NQ25 335 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 C2orf42Q9NWW7 574 aa12.4□□□□□ -0.42
RAPGEF1-201ENST00000372189 FOXE1O00358 373 aaPredicted RBP12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 HPGDSO60760 199 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 PPP1R3DO95685 299 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 AKAIN1P0CW23 69 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 AQP2P41181 271 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZP2Q05996 745 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 KCTD11Q693B1 232 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 KIAA1211LQ6NV74 962 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms