RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 OR51T1Q8NGJ9 327 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 OR5W2Q8NH69 310 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 ALG14Q96F25 216 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF285Q96NJ3 590 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 STACQ99469 402 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 KLHL9Q9P2J3 617 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.69
SYNE1-204ENST00000367248 B3GALT1Q9Y5Z6 326 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 ATG2BQ96BY7 2078 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 LOC102725191A0A1B0GVB3 256 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 STMND1H3BQB6 276 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 LCMT2O60294 686 aaKnown RBP10.71□□□□□ -0.69
SYNE1-204ENST00000367248 MAP2K3P46734 347 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 BATF2Q8N1L9 274 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 TBC1D15Q8TC07 691 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 TSLPQ969D9 159 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 MOV10Q9HCE1 1003 aaKnown RBP10.71□□□□□ -0.69
SYNE1-204ENST00000367248 MEPEQ9NQ76 525 aaPredicted RBP10.71□□□□□ -0.69
SYNE1-204ENST00000367248 INPP5EQ9NRR6 644 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 COL4A5P29400 1685 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 GPR171O14626 319 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 Q6ZPB1 254 aaPredicted RBP10.71□□□□□ -0.7
SYNE1-204ENST00000367248 BPHLQ86WA6 291 aaPredicted RBP10.71□□□□□ -0.7
SYNE1-204ENST00000367248 OR6T1Q8NGN1 323 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 PRR7Q8TB68 274 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 OR10A2Q9H208 303 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 CCDC187A0A096LP49 1063 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 PRAMEF25A6NGN4 478 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 EIF4E2O60573 245 aaKnown RBP10.71□□□□□ -0.7
SYNE1-204ENST00000367248 PTAFRP25105 342 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 STOMP27105 288 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 AKR1C2P52895 323 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 HES5Q5TA89 166 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 OR7E24Q6IFN5 339 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 EIF5AL1Q6IS14 154 aaKnown RBP10.71□□□□□ -0.7
SYNE1-204ENST00000367248 TBPL2Q6SJ96 375 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 SLC22A25Q6T423 547 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 MBOAT2Q6ZWT7 520 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 FAM57BQ71RH2 274 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 PTRH1Q86Y79 214 aaKnown RBP10.71□□□□□ -0.7
SYNE1-204ENST00000367248 PPP1R35Q8TAP8 253 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 FNDC8Q8TC99 324 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 TEX37Q96LM6 180 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 BCL7BQ9BQE9 202 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 BABAM2Q9NXR7 383 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF224Q9NZL3 707 aa10.71□□□□□ -0.7
SYNE1-204ENST00000367248 MEN1O00255 615 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 MSL3P1P0C860 447 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 C3P1Q6ZMU1 363 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 SPNS2Q8IVW8 549 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 SFTPA1Q8IWL2 248 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 CADM4Q8NFZ8 388 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 LANCL2Q9NS86 450 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 MED17Q9NVC6 651 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 RHBDD3Q9Y3P4 386 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 WIF1Q9Y5W5 379 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ATP23Q9Y6H3 246 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 CD22P20273 847 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 NFATC3Q12968 1075 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM150AQ86TG1 271 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 OR5L1Q8NGL2 311 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF587Q96SQ5 575 aaPredicted RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 LRRC61Q9BV99 259 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 EGLN3Q9H6Z9 239 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 EBF1Q9UH73 591 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 HIF3AQ9Y2N7 669 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 SEC14L2O76054 403 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 MPIG6BO95866 241 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ALPLP05186 524 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 BTG2P78543 158 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ANKRD19PQ9H560 264 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ABRACLQ9P1F3 81 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 PPIL1Q9Y3C6 166 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 NPFFR2Q9Y5X5 522 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 FAM90A27PA6NNH2 459 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 A8MVM7 634 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 C5orf67F2Z3F1 127 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 EIF1BO60739 113 aaKnown RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 BMXP51813 675 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 SIGLEC14Q08ET2 396 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 AKAP1Q92667 903 aaKnown RBP eCLIP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 DCLRE1CQ96SD1 692 aaKnown RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 RLIMQ9NVW2 624 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 POMT2Q9UKY4 750 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 BCAS1O75363 584 aaPredicted RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 GASTP01350 101 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 GM2AP17900 193 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 EPHA1P21709 976 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 SEC61A1P61619 476 aaKnown RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 DUSP5Q16690 384 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ESCO2Q56NI9 601 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 GLB1L2Q8IW92 636 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 CNOT9Q92600 299 aaKnown RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 TRAV6A0A075B6T7 132 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 CDK1P06493 297 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 GNAO1P09471 354 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 RAB3AP20336 220 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms