RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SLC6A12P48065 614 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC26A5P58743 744 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ISL1P61371 349 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 RPL23AP62750 156 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 DCUN1D4Q92564 292 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ADOQ96SZ5 270 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 BOKQ9UMX3 212 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 LOC102723532A0A0G2JNH3 316 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 MRPL21Q7Z2W9 205 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZBP1Q9H171 429 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 DUSP21Q9H596 190 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 TRIM64A6NGJ6 449 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 SERINC4A6NH21 518 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZDHHC11BP0C7U3 371 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ERVK-25P63136 954 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 MGAT3Q09327 533 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 PPA1Q15181 289 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 CD276Q5ZPR3 534 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR4F15Q8NGB8 312 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 AKAP6Q13023 2319 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 MN1Q10571 1320 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM82A0PJX8 343 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 E9PI62 339 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 BDKRB2P30411 391 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ERVK-16P61578 105 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 MFGE8Q08431 387 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 C17orf67Q0P5P2 114 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 SYPL1Q16563 259 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 CARD17Q5XLA6 110 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ABHD17CQ6PCB6 329 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF695Q8IW36 515 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 FAM83FQ8NEG4 500 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR14L1PQ8NHC6 308 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 EGLN2Q96KS0 407 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 EEF1E1-BLOC1S5C9J1V9 151 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 FOXD2O60548 495 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 USF2Q15853 346 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 RBM24Q9BX46 236 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 C1orf198Q9H425 327 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 KCNJ16Q9NPI9 418 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 CUTCQ9NTM9 273 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 HCFC1R1Q9NWW0 138 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM269A0A1B0GVZ9 245 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC22A23A1A5C7 686 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 B4DXG7 233 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 EFNA3P52797 238 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 MAP4K2Q12851 820 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 SH2D5Q6ZV89 423 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 FZD3Q9NPG1 666 aa11.19□□□□□ -0.62
CDC42BPA-203ENST00000366766 MPIG6BO95866 241 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 FCER2P06734 321 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 APLNRP35414 380 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 CTBSQ01459 385 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 IL22RA1Q8N6P7 574 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 RCBTB1Q8NDN9 531 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 MMP28Q9H239 520 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 C1orf123Q9NWV4 160 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 CIB4A0PJX0 185 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 TMEM200CA6NKL6 621 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 LPLP06858 475 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 GPLD1P80108 840 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 STEAP3Q658P3 488 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 LMF1Q96S06 567 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 MCOLN1Q9GZU1 580 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 FAM212BQ9NTI7 297 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 CUEDC1Q9NWM3 386 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 ARHGEF17Q96PE2 2063 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 TRAV36DV7A0A075B6V5 113 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 KLKB1P03952 638 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 CHRNEQ04844 493 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 SAXO2Q658L1 398 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 LIX1LQ8IVB5 337 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR2L13Q8N349 312 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 SGPP1Q9BX95 441 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 GPR160Q9UJ42 338 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 DVL2O14641 736 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 CA3P07451 260 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 NPPBP16860 134 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC2A5P22732 501 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 LILRB2Q8N423 598 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 GLIPR2Q9H4G4 154 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 MARCH5Q9NX47 278 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 PATJQ8NI35 1801 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 TRBV5-4A0A0C4DH59 114 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 LCATP04180 440 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC16A9Q7RTY1 509 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 FAM109AQ8N4B1 249 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 DNAAF1Q8NEP3 725 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 RSC1A1Q92681 617 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 IL20RAQ9UHF4 553 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC5A10A0PJK1 596 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 TBPP20226 339 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 TNFSF4P23510 183 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 GJA4P35212 333 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 CDC20Q12834 499 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 NRARPQ7Z6K4 114 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF546Q86UE3 836 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR51D1Q8NGF3 324 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 S100PBPQ96BU1 408 aa11.18□□□□□ -0.62
CDC42BPA-203ENST00000366766 KATNB1Q9BVA0 655 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms