RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 FNDC9Q8TBE3 224 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 PIGXQ8TBF5 258 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 SLC7A13Q8TCU3 470 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 LIPHQ8WWY8 451 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 TAAR8Q969N4 342 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 GMPPAQ96IJ6 420 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 RSRC1Q96IZ7 334 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 SRXN1Q9BYN0 137 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 ARMC1Q9NVT9 282 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 KLHL9Q9P2J3 617 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 ZNF629Q9UEG4 869 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 RELNP78509 3460 aa12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 HELZ2Q9BYK8 2649 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-201ENST00000361439 LOC102725191A0A1B0GVB3 256 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 AQP7P3A6NL99 342 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 GADD45GO95257 159 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 TGM6O95932 706 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 FPR1P21462 350 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 GTF2E2P29084 291 aaKnown RBP12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 SLC16A1P53985 500 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 CTBP2P56545 445 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 OR7A5Q15622 319 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 ANKDD1AQ495B1 522 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 ABLIM2Q6H8Q1 611 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 OR2T5Q6IEZ7 315 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 C3P1Q6ZMU1 363 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 ZNF730Q6ZMV8 503 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 SEM1Q6ZVN7 128 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 MAMDC2Q7Z304 686 aaPredicted RBP12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 CDK20Q8IZL9 346 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 MARVELD2Q8N4S9 558 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 OR2T29Q8NH02 315 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 TMEM255BQ8WV15 326 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 ASB5Q8WWX0 329 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 CCDC120Q96HB5 630 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 SFXN3Q9BWM7 321 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 BCO1Q9HAY6 547 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 MEPEQ9NQ76 525 aaPredicted RBP12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 COQ3Q9NZJ6 369 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 ERRFI1Q9UJM3 462 aaPredicted RBP12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 RASD1Q9Y272 281 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
NSMCE1-201ENST00000361439 FLNCQ14315 2725 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 A0A087WUU8 490 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 ZNF724A8MTY0 619 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 GPR171O14626 319 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 SMAD9O15198 467 aaKnown RBP12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 HNRNPRO43390 633 aaKnown RBP12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 SS18L1O75177 396 aaPredicted RBP12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 FKBP6O75344 327 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 AQP8O94778 261 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 CST1P01037 141 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 BGLAPP02818 100 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 FCGR1AP12314 374 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 CTSSP25774 331 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 RRM2P31350 389 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 OPRM1P35372 400 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 IFNGR2P38484 337 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 UGT2B15P54855 530 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 SPIBQ01892 262 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 PRKCDQ05655 676 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 CCNIQ14094 377 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 POU4F3Q15319 338 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 GUSBP1Q15486 140 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 ZNF74Q16587 644 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 ZFP1Q6P2D0 407 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 XKRXQ6PP77 449 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 H1FNTQ75WM6 255 aaPredicted RBP12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 MCEMP1Q8IX19 187 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 C9orf106Q8NAJ2 232 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 SGTBQ96EQ0 304 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 FUZQ9BT04 418 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 ASPNQ9BXN1 380 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 FANCFQ9NPI8 374 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 NANSQ9NR45 359 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 MRPL39Q9NYK5 338 aaKnown RBP12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 EMC3Q9P0I2 261 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 RHCGQ9UBD6 479 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 TESMINQ9Y4I5 508 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 AP4S1Q9Y587 144 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 LYVE1Q9Y5Y7 322 aa12.35□□□□□ -0.43
NSMCE1-201ENST00000361439 PHF3Q92576 2039 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 SH3PXD2BA1X283 911 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 CLEC18AA5D8T8 446 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 WIPF3A6NGB9 483 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 TOXO94900 526 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 DIRAS1O95057 198 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 HIST1H2ABP04908 130 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 YES1P07947 543 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
NSMCE1-201ENST00000361439 CHRNB4P30926 498 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms