RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 FAAHO00519 579 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 ITM2AO43736 263 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 LGI1O95970 557 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 CRYAAP02489 173 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 OR4A8P0C604 315 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 CREB1P16220 341 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 EPS8Q12929 822 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 ADIPOQQ15848 244 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 SPANXN4Q5MJ08 99 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 LIPNQ5VXI9 398 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 VHLLQ6RSH7 139 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 RNF130Q86XS8 419 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 WDR60Q8WVS4 1066 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 TESCQ96BS2 214 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 ADAM19Q9H013 955 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 LGALS13Q9UHV8 139 aa18.36■□□□□ 0.53
CD47-202ENST00000361309 LRP5LA4QPB2 252 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 AQP7P3A6NL99 342 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 NR5A2O00482 541 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 PGRP06401 933 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 IL7RP16871 459 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 CXCR1P25024 350 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 UBE2NP61088 152 aaKnown RBP18.35■□□□□ 0.53
CD47-202ENST00000361309 TUBA1BP68363 451 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 TUBA4AP68366 448 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 MRPL2Q5T653 305 aaKnown RBP18.35■□□□□ 0.53
CD47-202ENST00000361309 LRRC74BQ6ZQY2 392 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 TUBA1AQ71U36 451 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 NUDCD3Q8IVD9 361 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 ZNF781Q8N8C0 355 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 ZNF540Q8NDQ6 660 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 PLK3Q9H4B4 646 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 PIF1Q9H611 641 aa18.35■□□□□ 0.53
CD47-202ENST00000361309 MTHFD2LQ9H903 347 aaPredicted RBP18.35■□□□□ 0.53
CD47-202ENST00000361309 ZNF587BE7ETH6 402 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 PDE5AO76074 875 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 UQCRBP14927 111 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 RPS4Y1P22090 263 aaKnown RBP18.34■□□□□ 0.53
CD47-202ENST00000361309 SELENOPP49908 381 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 PPOXP50336 477 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 NAAAQ02083 359 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 BNIP2Q12982 314 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 GNA13Q14344 377 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 EFNB3Q15768 340 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 TMEM225Q6GV28 225 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 ANKRD16Q6P6B7 361 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 LINGO2Q7L985 606 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 BCL2L2Q92843 193 aaPredicted RBP18.34■□□□□ 0.53
CD47-202ENST00000361309 PKNOX2Q96KN3 472 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 CCDC115Q96NT0 180 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 ALKBH3Q96Q83 286 aaPredicted RBP18.34■□□□□ 0.53
CD47-202ENST00000361309 SEC61A2Q9H9S3 476 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 ADPRHL2Q9NX46 363 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 TENM1Q9UKZ4 2725 aa18.34■□□□□ 0.53
CD47-202ENST00000361309 A0A096LPE4 126 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 A0A1W2PPZ6 126 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 STAMBPO95630 424 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 DBIP07108 87 aaKnown RBP18.33■□□□□ 0.52
CD47-202ENST00000361309 CECR9P0C854 216 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 GKN3PP0CG01 181 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 CALCRP30988 508 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 S100A3P33764 101 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 ETV4P43268 484 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 IDH3GP51553 393 aaPredicted RBP18.33■□□□□ 0.52
CD47-202ENST00000361309 P2RY4P51582 365 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 CLNS1AP54105 237 aaKnown RBP18.33■□□□□ 0.52
CD47-202ENST00000361309 GSTA3Q16772 222 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 DPY19L1Q2PZI1 675 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 FAM174BQ3ZCQ3 159 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 CREB3L2Q70SY1 520 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 C1orf159Q96HA4 380 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 RAB1BQ9H0U4 201 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 RLIMQ9NVW2 624 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 CRNNQ9UBG3 495 aaPredicted RBP18.33■□□□□ 0.52
CD47-202ENST00000361309 BTNL2Q9UIR0 455 aa18.33■□□□□ 0.52
CD47-202ENST00000361309 DYSFO75923 2080 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 ARPC4-TTLL3A0A0A6YYG9 625 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 WDR91A4D1P6 747 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 CCDC154A6NI56 674 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 E9PBE3 544 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 MYZAPP0CAP1 466 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 PAX7P23759 505 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 IL2RGP31785 369 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 IFFO1Q0D2I5 559 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 C3orf36Q3SXR2 165 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 COX20Q5RI15 118 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 NIPAL3Q6P499 406 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 ZNF440Q8IYI8 595 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 RFLNBQ8N5W9 214 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 OR4F15Q8NGB8 312 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 TAPBPLQ9BX59 468 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 NELFAQ9H3P2 528 aa18.32■□□□□ 0.52
CD47-202ENST00000361309 hCG_2039718K7EN88 272 aa18.31■□□□□ 0.52
CD47-202ENST00000361309 TCF21O43680 179 aa18.31■□□□□ 0.52
CD47-202ENST00000361309 TYROBPO43914 113 aa18.31■□□□□ 0.52
CD47-202ENST00000361309 UPK3AO75631 287 aa18.31■□□□□ 0.52
CD47-202ENST00000361309 IGLV1-44P01699 117 aa18.31■□□□□ 0.52
CD47-202ENST00000361309 NR2F1P10589 423 aa18.31■□□□□ 0.52
CD47-202ENST00000361309 DAOP14920 347 aa18.31■□□□□ 0.52
CD47-202ENST00000361309 GIFP27352 417 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms