RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 MAKP20794 623 aa16■□□□□ 0.15
CLK2-202ENST00000361168 MAP2K6P52564 334 aa16■□□□□ 0.15
CLK2-202ENST00000361168 AGFG1P52594 562 aaKnown RBP16■□□□□ 0.15
CLK2-202ENST00000361168 RPS3AP61247 264 aaKnown RBP16■□□□□ 0.15
CLK2-202ENST00000361168 H3F3AP84243 136 aa16■□□□□ 0.15
CLK2-202ENST00000361168 FOXF2Q12947 444 aa16■□□□□ 0.15
CLK2-202ENST00000361168 C1orf185Q5T7R7 199 aa16■□□□□ 0.15
CLK2-202ENST00000361168 B3GNT6Q6ZMB0 384 aa16■□□□□ 0.15
CLK2-202ENST00000361168 ZNF730Q6ZMV8 503 aa16■□□□□ 0.15
CLK2-202ENST00000361168 ZNF771Q7L3S4 317 aaPredicted RBP16■□□□□ 0.15
CLK2-202ENST00000361168 CHMP1BQ7LBR1 199 aa16■□□□□ 0.15
CLK2-202ENST00000361168 SLC46A3Q7Z3Q1 461 aa16■□□□□ 0.15
CLK2-202ENST00000361168 MED12LQ86YW9 2145 aa16■□□□□ 0.15
CLK2-202ENST00000361168 OR4C15Q8NGM1 316 aa16■□□□□ 0.15
CLK2-202ENST00000361168 ACOT11Q8WXI4 607 aaPredicted RBP16■□□□□ 0.15
CLK2-202ENST00000361168 LRTOMTQ8WZ04 291 aa16■□□□□ 0.15
CLK2-202ENST00000361168 ALPK1Q96QP1 1244 aa16■□□□□ 0.15
CLK2-202ENST00000361168 PRDM4Q9UKN5 801 aa16■□□□□ 0.15
CLK2-202ENST00000361168 SLC22A20A6NK97 555 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 CDC42EP2O14613 210 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 AHSA1O95433 338 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 PMS2P2O95744 297 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 BGLAPP02818 100 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 CLK1P49759 484 aaKnown RBP15.99■□□□□ 0.15
CLK2-202ENST00000361168 P2RY4P51582 365 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 FAM69AQ5T7M9 428 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 NSUN5P2Q63ZY6 315 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 HMBOX1Q6NT76 420 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 AMIGO2Q86SJ2 522 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 C10orf53Q8N6V4 93 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 OR4K5Q8NGD3 323 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 OR9Q2Q8NGE9 314 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 DUS3LQ96G46 650 aaKnown RBP15.99■□□□□ 0.15
CLK2-202ENST00000361168 ARMC1Q9NVT9 282 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 ING1Q9UK53 422 aaPredicted RBP15.99■□□□□ 0.15
CLK2-202ENST00000361168 MEMO1Q9Y316 297 aa15.99■□□□□ 0.15
CLK2-202ENST00000361168 SH3PXD2BA1X283 911 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 M0R082 166 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 TNFRSF11BO00300 401 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 IFI30P13284 250 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 GABRA1P14867 456 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 GRPRP30550 384 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 IFNA8P32881 189 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 RBM34P42696 430 aaKnown RBP15.98■□□□□ 0.15
CLK2-202ENST00000361168 GPR4P46093 362 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 NUP107P57740 925 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 ZNF74Q16587 644 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 ANKRD34AQ69YU3 496 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 ZNF417Q8TAU3 575 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 FAM46AQ96IP4 442 aaKnown RBP15.98■□□□□ 0.15
CLK2-202ENST00000361168 DMRTA2Q96SC8 542 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 ZNF587Q96SQ5 575 aaPredicted RBP15.98■□□□□ 0.15
CLK2-202ENST00000361168 SEMA6AQ9H2E6 1030 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 ERRFI1Q9UJM3 462 aaPredicted RBP15.98■□□□□ 0.15
CLK2-202ENST00000361168 TRAPPC4Q9Y296 219 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 MED31Q9Y3C7 131 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 SAMHD1Q9Y3Z3 626 aaKnown RBP15.98■□□□□ 0.15
CLK2-202ENST00000361168 KRT36O76013 467 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 FKBP2P26885 142 aaKnown RBP15.98■□□□□ 0.15
CLK2-202ENST00000361168 HMGA2P52926 109 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 MBOAT2Q6ZWT7 520 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 ZER1Q7Z7L7 766 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 MFSD8Q8NHS3 518 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 CPNE4Q96A23 557 aaPredicted RBP15.98■□□□□ 0.15
CLK2-202ENST00000361168 BPIFA2Q96DR5 249 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 RNF122Q9H9V4 155 aa15.98■□□□□ 0.15
CLK2-202ENST00000361168 SPTBN1Q01082 2364 aaKnown RBP15.97■□□□□ 0.15
CLK2-202ENST00000361168 SPTAN1Q13813 2472 aaKnown RBP15.97■□□□□ 0.15
CLK2-202ENST00000361168 DOCK7Q96N67 2140 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 RNF224P0DH78 156 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 PRKACGP22612 351 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 NTF4P34130 210 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 CSNK2A1P68400 391 aaPredicted RBP15.97■□□□□ 0.15
CLK2-202ENST00000361168 SRSF1Q07955 248 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLK2-202ENST00000361168 CDSNQ15517 529 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 FCRLAQ7L513 359 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 RNF128Q8TEB7 428 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 INTS12Q96CB8 462 aaKnown RBP15.97■□□□□ 0.15
CLK2-202ENST00000361168 CCDC120Q96HB5 630 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 SLC19A3Q9BZV2 496 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 ANKRD19PQ9H560 264 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 REEP1Q9H902 201 aa15.97■□□□□ 0.15
CLK2-202ENST00000361168 MBD3L4A6NDZ8 208 aaPredicted RBP15.96■□□□□ 0.15
CLK2-202ENST00000361168 MBD3L3A6NE82 208 aaPredicted RBP15.96■□□□□ 0.15
CLK2-202ENST00000361168 MBD3L5A6NJ08 208 aaPredicted RBP15.96■□□□□ 0.15
CLK2-202ENST00000361168 CD8B2A6NJW9 211 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 E9PLN8 166 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 CLOCKO15516 846 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 HLA-DOBP13765 273 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 POU2F1P14859 743 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 OMPP47874 163 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 OTUD3Q5T2D3 398 aaPredicted RBP15.96■□□□□ 0.15
CLK2-202ENST00000361168 CCDC71Q8IV32 467 aaPredicted RBP15.96■□□□□ 0.15
CLK2-202ENST00000361168 MBD3L2Q8NHZ7 208 aaPredicted RBP15.96■□□□□ 0.15
CLK2-202ENST00000361168 POP5Q969H6 163 aaKnown RBP15.96■□□□□ 0.15
CLK2-202ENST00000361168 HS6ST2Q96MM7 605 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 PKP2Q99959 881 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 VKORC1Q9BQB6 163 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 TAPBPLQ9BX59 468 aa15.96■□□□□ 0.15
CLK2-202ENST00000361168 PRRG4Q9BZD6 226 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms