RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SFXN1Q9H9B4 322 aa6.31□□□□□ -1.4
RTN4-203ENST00000357376 MRTO4Q9UKD2 239 aaKnown RBP6.31□□□□□ -1.4
RTN4-203ENST00000357376 SIRT4Q9Y6E7 314 aaPredicted RBP6.31□□□□□ -1.4
RTN4-203ENST00000357376 CDC14CA4D256 554 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 SOX1O00570 391 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 CHP2O43745 196 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 TBX19O60806 448 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ATP1B1P05026 303 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 OR2T7P0C7T2 308 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 GUCA1AP43080 201 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 HHEXQ03014 270 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 FUT5Q11128 374 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 BTN1A1Q13410 526 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 DOC2BQ14184 412 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 MLC1Q15049 377 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 NKPD1Q17RQ9 610 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 COL28A1Q2UY09 1125 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 PXDC1Q5TGL8 231 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 GARNL3Q5VVW2 1013 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 CD276Q5ZPR3 534 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 SLC35D2Q76EJ3 337 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 KCTD9Q7L273 389 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 LSM14AQ8ND56 463 aaKnown RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 OR4D9Q8NGE8 314 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 OR2T27Q8NH04 317 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 MED30Q96HR3 178 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 GPER1Q99527 375 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ALG12Q9BV10 488 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ZNF471Q9BX82 626 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 SEMA4CQ9C0C4 833 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ENKD1Q9H0I2 346 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 EMC7Q9NPA0 242 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 UPB1Q9UBR1 384 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 KLK11Q9UBX7 282 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ACAD8Q9UKU7 415 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 PTPRDP23468 1912 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 C13orf42A0A1B0GVH6 325 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 KANTRA0A1W2PQU2 76 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 DCDC2BA2VCK2 349 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ACOT7O00154 380 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 RECKO95980 971 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 PLATP00750 562 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 SRMP19623 302 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 CXCL3P19876 107 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 PTBP1P26599 531 aaKnown RBP eCLIP6.3□□□□□ -1.41e-7■■■■□ 26.1
RTN4-203ENST00000357376 HOXD11P31277 338 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 DUSP8Q13202 625 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 EXOSC2Q13868 293 aaKnown RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 OPCMLQ14982 345 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 UBE2NLQ5JXB2 153 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ELP2Q6IA86 826 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 LNX2Q8N448 690 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 FAM3CQ92520 227 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 TMEM106AQ96A25 262 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ELF4Q99607 663 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 TMEM185BQ9H7F4 350 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 PPP1R3EQ9H7J1 279 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 IFT46Q9NQC8 304 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 EVA1BQ9NVM1 165 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 NCDNQ9UBB6 729 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 COPS3Q9UNS2 423 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 CAMK2AQ9UQM7 478 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ZNF281Q9Y2X9 895 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 NPFFR2Q9Y5X5 522 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 CXorf51AA0A1B0GTR3 108 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 A0A1W2PPL8 197 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 SHISA3A0PJX4 238 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ERVH48-1M5A8F1 160 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 RAF1P04049 648 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 DRD3P35462 400 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 KIAA1024LP59773 190 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 PPP2CBP62714 309 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 PPP2CAP67775 309 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 HTR4Q13639 388 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 LRRN1Q6UXK5 716 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 Q6ZSR6 202 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 DPY19L4Q7Z388 723 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 CMTM4Q8IZR5 234 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 IL17RCQ8NAC3 791 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 OR4N2Q8NGD1 307 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 OR2T4Q8NH00 348 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 THAP3Q8WTV1 239 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 C15orf40Q8WUR7 153 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 CCDC107Q8WV48 283 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 NKX3-1Q99801 234 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 FAM83CQ9BQN1 747 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 ZNF436Q9C0F3 470 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 KIR3DX1Q9H7L2 352 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 B3GNT2Q9NY97 397 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 CPNE7Q9UBL6 633 aa6.3□□□□□ -1.4
RTN4-203ENST00000357376 C19orf53Q9UNZ5 99 aaPredicted RBP6.3□□□□□ -1.4
RTN4-203ENST00000357376 A0A0B4J293 547 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 IGKV1-8A0A0C4DH67 115 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 TCRBV21S2A2A0A5A6 115 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 LINC01553A4QN01 128 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 OR2AT4A6NND4 320 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 IDSB3KWA1 339 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 P2RX6O15547 441 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms