RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SLC25A36Q96CQ1 311 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 ARL5BQ96KC2 179 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 POTEKPQ9BYX7 375 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.08□□□□□ -0.15
CTSA-202ENST00000354880 KLHL1Q9NR64 748 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 DKK4Q9UBT3 224 aa14.08□□□□□ -0.15
CTSA-202ENST00000354880 FREM3P0C091 2139 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 TRIM64A6NGJ6 449 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 SURF4O15260 269 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 TLX2O43763 284 aaPredicted RBP14.08□□□□□ -0.16
CTSA-202ENST00000354880 XPNPEP2O43895 674 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 PRKYO43930 277 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 NME2P1O60361 137 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 CEACAM4O75871 244 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 RFPL3SP0C7P2 107 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 CD46P15529 392 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 ZNF17P17021 662 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 NME2P22392 152 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 EFNB1P98172 346 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 TOMM20Q15388 145 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 TMEM44Q2T9K0 475 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 GLYR1Q49A26 553 aaPredicted RBP14.08□□□□□ -0.16
CTSA-202ENST00000354880 GXYLT1Q4G148 440 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 IGFL2Q6UWQ7 119 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 CCDC81Q6ZN84 652 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 NANOGNBQ7Z5D8 188 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 SLC25A43Q8WUT9 341 aaPredicted RBP14.08□□□□□ -0.16
CTSA-202ENST00000354880 RELTQ969Z4 430 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 DTNBP1Q96EV8 351 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 PLEKHA8Q96JA3 519 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 C5orf34Q96MH7 638 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 CCDC86Q9H6F5 360 aaKnown RBP14.08□□□□□ -0.16
CTSA-202ENST00000354880 BAIAP2Q9UQB8 552 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 MGAQ8IWI9 3026 aa14.08□□□□□ -0.16
CTSA-202ENST00000354880 MED12Q93074 2177 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 MCIDASD6RGH6 385 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 FTCDNL1E5RQL4 147 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 TSPAN19P0C672 248 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 TFPIP10646 304 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 PEPDP12955 493 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 UQCRC1P31930 480 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 GRK5P34947 590 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 RPL4P36578 427 aaKnown RBP14.07□□□□□ -0.16
CTSA-202ENST00000354880 AQP2P41181 271 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 ID4P47928 161 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 CSNK2BP67870 215 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 SLC6A19Q695T7 634 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 GALNTL5Q7Z4T8 443 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 SPACA3Q8IXA5 215 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 FAM26EQ8N5C1 309 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 TSPAN14Q8NG11 270 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 MFSD8Q8NHS3 518 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 TMEM163Q8TC26 289 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 UBL7Q96S82 380 aaPredicted RBP14.07□□□□□ -0.16
CTSA-202ENST00000354880 PIGQQ9BRB3 760 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 TMEM185BQ9H7F4 350 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 CLN6Q9NWW5 311 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 SCN3BQ9NY72 215 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 MRPS18CQ9Y3D5 142 aaKnown RBP14.07□□□□□ -0.16
CTSA-202ENST00000354880 NCKAP5O14513 1909 aa14.07□□□□□ -0.16
CTSA-202ENST00000354880 OR2M5A3KFT3 312 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 KLRC4-KLRK1H3BQV0 150 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 PPP1R3DO95685 299 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 SMIM18P0DKX4 95 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
CTSA-202ENST00000354880 GDF1P27539 372 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 IDUAP35475 653 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 EIF2S3P41091 472 aaKnown RBP14.06□□□□□ -0.16
CTSA-202ENST00000354880 TNFSF10P50591 281 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 MLLT10P55197 1068 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 BLMHQ13867 455 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 MFSD13AQ14CX5 517 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 TMEM201Q5SNT2 666 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 DPY19L2P2Q6ZN68 376 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 IGFN1Q86VF2 1251 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 OR5J2Q8NH18 312 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 MOSPD2Q8NHP6 518 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 Q96MT0 163 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 GPX7Q96SL4 187 aaPredicted RBP14.06□□□□□ -0.16
CTSA-202ENST00000354880 B4GALT7Q9UBV7 327 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 TPRKBQ9Y3C4 175 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 URB1O60287 2271 aaKnown RBP14.06□□□□□ -0.16
CTSA-202ENST00000354880 SH3D21A4FU49 640 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 FAM20BO75063 409 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 NOS3P29474 1203 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 GRPRP30550 384 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 CLK1P49759 484 aaKnown RBP14.06□□□□□ -0.16
CTSA-202ENST00000354880 CDH15P55291 814 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 GABARAPL2P60520 117 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 FOXK2Q01167 660 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 RPL18Q07020 188 aaKnown RBP14.06□□□□□ -0.16
CTSA-202ENST00000354880 OR7A5Q15622 319 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 SGCBQ16585 318 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 OCLNQ16625 522 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 ALG10Q5BKT4 473 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 ZNF766Q5HY98 468 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 SLC25A30Q5SVS4 291 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 SLC35F1Q5T1Q4 408 aa14.06□□□□□ -0.16
CTSA-202ENST00000354880 YRDCQ86U90 279 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms