RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DEFB109BQ30KR1 87 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 SLC25A25Q6KCM7 469 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 ZNF517Q6ZMY9 492 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 ZBTB8BQ8NAP8 495 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 OR1L3Q8NH93 324 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 NANOS1Q8WY41 292 aaKnown RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 C19orf43Q9BQ61 176 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 ALG12Q9BV10 488 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 NAA50Q9GZZ1 169 aaKnown RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 ACOT13Q9NPJ3 140 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 PRDM7Q9NQW5 492 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 WDR90Q96KV7 1748 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 TDRD15B5MCY1 1934 aaKnown RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 SYT5O00445 386 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 ZNF593O00488 134 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 RBBP9O75884 186 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 MPIG6BO95866 241 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 APOC1P02654 83 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 ZNF26P17031 533 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 PHC1P78364 1004 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 FAM53BQ14153 422 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 RAB11BQ15907 218 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 CDNFQ49AH0 187 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 CDH24Q86UP0 819 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 ZNF584Q8IVC4 421 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 STACQ99469 402 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 URM1Q9BTM9 101 aaKnown RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 TRAV36DV7A0A075B6V5 113 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 EEF1E1-BLOC1S5C9J1V9 151 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 EPHA8P29322 1005 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 PITPNBP48739 271 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 FOXK2Q01167 660 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 PGBD2Q6P3X8 592 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 SLC16A14Q7RTX9 510 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 SEMA4CQ9C0C4 833 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 TRAV18A0A075B6X5 111 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 OR2A25A4D2G3 310 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 RAD51DO75771 328 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 STK17BO94768 372 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 LGI1O95970 557 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 CD3GP09693 182 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 S100A10P60903 97 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 TGFBR3Q03167 851 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 GPR139Q6DWJ6 353 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 OR8H1Q8NGG4 311 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 GPR148Q8TDV2 347 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 GAB3Q8WWW8 586 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 TRIM63Q969Q1 353 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 NOSIPQ9Y314 301 aaKnown RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 PCDHGA6Q9Y5G7 932 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 A0A087WUU8 490 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 ERCC1P07992 297 aaPredicted RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 ACP2P11117 423 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 MAN2A2P49641 1150 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 CHRFAM7AQ494W8 412 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 C1orf140Q5VVS0 124 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 HBMQ6B0K9 141 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 C16orf47Q6ZP98 133 aaPredicted RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 FAM57BQ71RH2 274 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 RNF113BQ8IZP6 322 aaKnown RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 PRR18Q8N4B5 295 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 NINJ1Q92982 152 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 LRFN1Q9P244 771 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 KCNS2Q9ULS6 477 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 A0A0A6YYD5 115 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 MEIS3P1A6NDR6 274 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 IL32P24001 234 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 GPR3P46089 330 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 P2RY14Q15391 338 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 SF3A2Q15428 464 aaKnown RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 PM20D2Q8IYS1 436 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 GATA6Q92908 595 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 SLC41A2Q96JW4 573 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 PCDHB16Q9NRJ7 776 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 H3BMQ9 156 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 PRKYO43930 277 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 CRTAPO75718 401 aaPredicted RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
SMC6-201ENST00000351948 CEBPGP53567 150 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 SIGLEC14Q08ET2 396 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 DTWD2Q8NBA8 298 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 SLC37A3Q8NCC5 494 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 COG8Q96MW5 612 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 EMC3Q9P0I2 261 aa12.62□□□□□ -0.39
SMC6-201ENST00000351948 EP400Q96L91 3159 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 GREM1O60565 184 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 PDGFBP01127 241 aaPredicted RBP12.61□□□□□ -0.39
SMC6-201ENST00000351948 POU2F2P09086 479 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 SFRP4Q6FHJ7 346 aaPredicted RBP12.61□□□□□ -0.39
SMC6-201ENST00000351948 THOC7Q6I9Y2 204 aaKnown RBP12.61□□□□□ -0.39
SMC6-201ENST00000351948 GALNT11Q8NCW6 608 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 UBQLN3Q9H347 655 aa12.61□□□□□ -0.39
SMC6-201ENST00000351948 ADAM18Q9Y3Q7 739 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms