RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZFAND5O76080 213 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 LDOC1O95751 146 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 IL1AP01583 271 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 CD14P08571 375 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 SBK2P0C263 348 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 CLUP10909 449 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 CCL4P13236 92 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 CD53P19397 219 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 PAICSP22234 425 aaKnown RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 GABRA5P31644 462 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 AQP2P41181 271 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ETV6P41212 452 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 DIO1P49895 249 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 CCR4P51679 360 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 SLC25A1P53007 311 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 SUMO3P55854 103 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 NRG3P56975 720 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 RPS25P62851 125 aaKnown RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF85Q03923 595 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 POU4F2Q12837 409 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 CBFBQ13951 182 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 GALEQ14376 348 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 PCOLCEQ15113 449 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 SLC35D3Q5M8T2 416 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 LIPKQ5VXJ0 399 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 VASNQ6EMK4 673 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 TUBA3EQ6PEY2 450 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 B3GLCTQ6Y288 498 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 Q6ZNX1 250 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 C16orf47Q6ZP98 133 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 GRINAQ7Z429 371 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 IGFN1Q86VF2 1251 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ADGRG3Q86Y34 549 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 TMCO5AQ8N6Q1 288 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ARIH2OSQ8N7S6 290 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 EXD3Q8N9H8 876 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 OR52E2Q8NGJ4 325 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 OR51G2Q8NGK0 314 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 OR6S1Q8NH40 331 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 OR4K13Q8NH42 304 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 B4GALNT2Q8NHY0 566 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF563Q8TA94 476 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 FNDC8Q8TC99 324 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 GATAD2BQ8WXI9 593 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ATOH1Q92858 354 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 UFD1Q92890 307 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 NTNG2Q96CW9 530 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 KTI12Q96EK9 354 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 IMMP1LQ96LU5 166 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 MOGAT1Q96PD6 335 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 COQ7Q99807 217 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 CRB3Q9BUF7 120 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 PTDSS2Q9BVG9 487 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 GTPBP2Q9BX10 602 aaKnown RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ASPNQ9BXN1 380 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 SMOC1Q9H4F8 434 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 FKRPQ9H9S5 495 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 HMG20AQ9NP66 347 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 TXNL4BQ9NX01 149 aaKnown RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 C19orf25Q9UFG5 118 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF229Q9UJW7 825 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 FBXL4Q9UKA2 621 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 SSR3Q9UNL2 185 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 B3GALT1Q9Y5Z6 326 aa6.29□□□□□ -1.4
TRIM55-203ENST00000350034 SPIN1Q9Y657 262 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-203ENST00000350034 TRIOO75962 3097 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 FRYQ5TBA9 3013 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 TRAV36DV7A0A075B6V5 113 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 TMEM72A0PK05 275 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 OR6C68A6NDL8 312 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 ANKUB1A6NFN9 424 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 B4DXG7 233 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 TAF4O00268 1085 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 SLC30A4O14863 429 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 KHNYNO15037 678 aaKnown RBP6.28□□□□□ -1.4
TRIM55-203ENST00000350034 FLRT2O43155 660 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 SCO2O43819 266 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 GDF9O60383 454 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 KLF7O75840 302 aaPredicted RBP6.28□□□□□ -1.4
TRIM55-203ENST00000350034 WISP1O95388 367 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 MT-ATP6P00846 226 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 TFP02787 698 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 UMODP07911 640 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 FBXO45P0C2W1 286 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 GP1BBP13224 206 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF12P17014 697 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 CD40LGP29965 261 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 AVPR2P30518 371 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 RPL4P36578 427 aaKnown RBP6.28□□□□□ -1.4
TRIM55-203ENST00000350034 RPS19P39019 145 aaKnown RBP6.28□□□□□ -1.4
TRIM55-203ENST00000350034 PTGDSP41222 190 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 HTR3AP46098 478 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 CAPZA2P47755 286 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 POLR2HP52434 150 aaKnown RBP6.28□□□□□ -1.4
TRIM55-203ENST00000350034 FBXW4P57775 412 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 RAB15P59190 212 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 ERVK-25P63136 954 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 ACTC1P68032 377 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 ACTA1P68133 377 aa6.28□□□□□ -1.4
TRIM55-203ENST00000350034 FABP5Q01469 135 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms