RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 NXF5Q9H1B4 397 aaKnown RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 SCP2D1Q9UJQ7 156 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 FBXL3Q9UKT7 428 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 ATXN7L1Q9ULK2 861 aaPredicted RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 TBC1D24Q9ULP9 559 aa10.1□□□□□ -0.79
CLCN6-202ENST00000346436 POLR2AP24928 1970 aaKnown RBP10.1□□□□□ -0.79
CLCN6-202ENST00000346436 OR2A25A4D2G3 310 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 PRAMEF25A6NGN4 478 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 FAM166BA8MTA8 275 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 LMO7DNF2Z398 122 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 KLK8O60259 260 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 HPGDSO60760 199 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 CRYAAP02489 173 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF806P0C7X5 589 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SLC35A2P78381 396 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF91Q05481 1191 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 HTR4Q13639 388 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 HES3Q5TGS1 186 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 PRAMEF17Q5VTA0 474 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 NLRC3Q7RTR2 1065 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 UBE2Q1Q7Z7E8 422 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF808Q8N4W9 903 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SLC38A5Q8WUX1 472 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 S100A16Q96FQ6 103 aaKnown RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SDHAF2Q9NX18 166 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 CLEC2LP0C7M8 214 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF81P51508 661 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 DCST2Q5T1A1 773 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 LEG1Q6P5S2 330 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 VRK2Q86Y07 508 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 WFDC8Q8IUA0 241 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 CXorf36Q9H7Y0 433 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 DUSP13Q9UII6 198 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 MEGF11A6BM72 1044 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SNU13P55769 128 aaKnown RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 WNT4P56705 351 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 GNB2P62879 340 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 HTRA4P83105 476 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF750Q32MQ0 723 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SYT6Q5T7P8 510 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 FKBP14Q9NWM8 211 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 NUP50Q9UKX7 468 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 LDB3O75112 727 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 CHRM4P08173 479 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 ATF4P18848 351 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 UGT2B10P36537 528 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SLC19A1P41440 591 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 CLPPQ16740 277 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 GGTA1PQ4G0N0 100 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 CCNJQ5T5M9 372 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF782Q6ZMW2 699 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 LYSMD2Q8IV50 215 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 AKAP1Q92667 903 aaKnown RBP eCLIP10.09□□□□□ -0.792e-6■■□□□ 12.1
CLCN6-202ENST00000346436 RRNAD1Q96FB5 475 aaKnown RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SGCZQ96LD1 299 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 OR4K3Q96R72 315 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 RNF32Q9H0A6 362 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 MYNNQ9NPC7 610 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 TEX10Q9NXF1 929 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 HIF3AQ9Y2N7 669 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 MEIOCA2RUB1 952 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 F5H5K5 113 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 CD300CQ08708 224 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 OR8B8Q15620 311 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SLC22A25Q6T423 547 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SLCO4C1Q6ZQN7 724 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 WDR20Q8TBZ3 569 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SAP130Q9H0E3 1048 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 SLC6A17Q9H1V8 727 aa10.09□□□□□ -0.79
CLCN6-202ENST00000346436 PRMT8Q9NR22 394 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-202ENST00000346436 PCP4L1A6NKN8 68 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 FAM171A2A8MVW0 826 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 K7ESM1 405 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 SYT7O43581 403 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ETHE1O95571 254 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 GYPBP06028 91 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 GPX2P18283 190 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 DRD5P21918 477 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 CASP3P42574 277 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ATP1B3P54709 279 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 AIMP2Q13155 320 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 DUSP7Q16829 419 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 EIF5AL1Q6IS14 154 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 CD300LGQ6UXG3 332 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 NUDT9Q9BW91 350 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 WSB2Q9NYS7 404 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 YARS2Q9Y2Z4 477 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 MTCH2Q9Y6C9 303 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 CTNSO60931 367 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TGM4P49221 684 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TMPRSS3P57727 454 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 RPP30P78346 268 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TIAL1Q01085 375 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 RAB31Q13636 194 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ELAVL1Q15717 326 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF385BQ569K4 471 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 CYHR1Q6ZMK1 362 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 SIRT6Q8N6T7 355 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 BCORP1Q8N888 145 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 OR1E3Q8WZA6 343 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms