RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 FAM221AA4D161 298 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 TMEM247A6NEH6 219 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 A8MXE2 369 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF264O43296 627 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 PGM3O95394 542 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 BCHEP06276 602 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 EDNRAP25101 427 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 OPRM1P35372 400 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ARHGDIAP52565 204 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 RAC1P63000 192 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 SLC25A53Q5H9E4 307 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 KRT80Q6KB66 452 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 USP51Q70EK9 711 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 TSEN54Q7Z6J9 526 aaKnown RBP14.36□□□□□ -0.11
RAB5C-201ENST00000346213 COMTD1Q86VU5 262 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 HEATR5AQ86XA9 2040 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 HS3ST5Q8IZT8 346 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF619Q8N2I2 560 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 TMCO5AQ8N6Q1 288 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 OR2V1Q8NHB1 315 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 CYGBQ8WWM9 190 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 GEMIN6Q8WXD5 167 aaKnown RBP14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ROBO4Q8WZ75 1007 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 DNAJA3Q96EY1 480 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 HOXD1Q9GZZ0 328 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 SMURF2Q9HAU4 748 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ING1Q9UK53 422 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-201ENST00000346213 DSPPQ9NZW4 1301 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 A0A1W2PNR3 127 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 DPPA5A6NC42 116 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 DUXAA6NLW8 204 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 SIAH2O43255 324 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 CYP7B1O75881 506 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 AK1P00568 194 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 SSTR2P30874 369 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 CCR4P51679 360 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 FAM27E3Q08E93 113 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 PPP1R8Q12972 351 aaKnown RBP14.36□□□□□ -0.11
RAB5C-201ENST00000346213 RFX4Q33E94 735 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 GPAT3Q53EU6 434 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 CNEP1R1Q8N9A8 125 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF527Q8NB42 609 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ATP6V1C2Q8NEY4 427 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 KLHL15Q96M94 604 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF347Q96SE7 839 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 EPYCQ99645 322 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 RBM24Q9BX46 236 aaKnown RBP14.36□□□□□ -0.11
RAB5C-201ENST00000346213 LAT2Q9GZY6 243 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 REEP1Q9H902 201 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 DNAJB12Q9NXW2 375 aaKnown RBP14.36□□□□□ -0.11
RAB5C-201ENST00000346213 KCNN3Q9UGI6 736 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF175Q9Y473 711 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 U3KQV3 271 aa14.36□□□□□ -0.11
RAB5C-201ENST00000346213 IGHV3-15A0A0B4J1V0 119 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 GTPBP1O00178 669 aaKnown RBP14.35□□□□□ -0.11
RAB5C-201ENST00000346213 DIRAS1O95057 198 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 NUDT14O95848 222 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 CSTAP01040 98 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 GUSBP08236 651 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 ITGA2P17301 1181 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 SUMO3P55854 103 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-201ENST00000346213 MYBPHQ13203 477 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF239Q16600 458 aaKnown RBP14.35□□□□□ -0.11
RAB5C-201ENST00000346213 ABHD3Q8WU67 409 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 RASSF5Q8WWW0 418 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF607Q96SK3 696 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 EXD2Q9NVH0 621 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 RLIMQ9NVW2 624 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 NDUFAF4Q9P032 175 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 VPS13CQ709C8 3753 aa14.35□□□□□ -0.11
RAB5C-201ENST00000346213 AGAP5A6NIR3 686 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 LINC01387J3KSC0 135 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 EIF4E2O60573 245 aaKnown RBP14.34□□□□□ -0.11
RAB5C-201ENST00000346213 CTAG2O75638 210 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 MFN2O95140 757 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 GNAO1P09471 354 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 CD247P20963 164 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 PRKACGP22612 351 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 KIR2DL3P43628 341 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 GNA13Q14344 377 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 SF3B4Q15427 424 aaKnown RBP eCLIP14.34□□□□□ -0.119e-6■□□□□ 11.2
RAB5C-201ENST00000346213 PRAMEF8Q5VWM4 474 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 PRAMEF7Q5VXH5 474 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 TTC23Q5W5X9 447 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 HBMQ6B0K9 141 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 P4HA3Q7Z4N8 544 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 VRK2Q86Y07 508 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF610Q8N9Z0 462 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 ZFP3Q96NJ6 502 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 TRNT1Q96Q11 434 aaKnown RBP14.34□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF300Q96RE9 604 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-201ENST00000346213 BCL2L10Q9HD36 194 aa14.34□□□□□ -0.11
RAB5C-201ENST00000346213 TMEFF2Q9UIK5 374 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-201ENST00000346213 SAMHD1Q9Y3Z3 626 aaKnown RBP14.34□□□□□ -0.11
RAB5C-201ENST00000346213 H3BNH8 94 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 SMIM18P0DKX4 95 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 NR2F1P10589 423 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 ENPP1P22413 925 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 ELK4P28324 431 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 RYKP34925 604 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms