RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ARPC3O15145 178 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 IDH3BO43837 385 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 PPM1BO75688 479 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 SERPINI2O75830 405 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 NPR2P20594 1047 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 PSMB10P40306 273 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 AQP2P41181 271 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 CDKN2AP42771 156 aaKnown RBP14.1□□□□□ -0.15
UPF3B-202ENST00000345865 GDI2P50395 445 aaKnown RBP14.1□□□□□ -0.15
UPF3B-202ENST00000345865 SIRPAP78324 504 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 PON3Q15166 354 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 SF3A2Q15428 464 aaKnown RBP14.1□□□□□ -0.15
UPF3B-202ENST00000345865 TTLL10Q6ZVT0 673 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 ATG4DQ86TL0 474 aaPredicted RBP14.1□□□□□ -0.15
UPF3B-202ENST00000345865 MS4A15Q8N5U1 240 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 BMPERQ8N8U9 685 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 POMGNT2Q8NAT1 580 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 TRMT10AQ8TBZ6 339 aaKnown RBP14.1□□□□□ -0.15
UPF3B-202ENST00000345865 TRIM63Q969Q1 353 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 RNF170Q96K19 258 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 Q96M85 177 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 LRFN5Q96NI6 719 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 NCDNQ9UBB6 729 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 ALG5Q9Y673 324 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 TTC36A6NLP5 189 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 C17orf51A8MQB3 221 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 BLOC1S5-TXNDC5H3BN57 136 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 PSMD9O00233 223 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 ZNF217O75362 1048 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 SRFP11831 508 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 ATF1P18846 271 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 CD83Q01151 205 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 LTBQ06643 244 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 LINC01590Q5TEZ4 76 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 ZNF57Q68EA5 555 aaPredicted RBP14.1□□□□□ -0.15
UPF3B-202ENST00000345865 MZT2BQ6NZ67 158 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 GPR135Q8IZ08 494 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 SYS1Q8N2H4 156 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 TEX19Q8NA77 164 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 OR6K6Q8NGW6 343 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 PHOSPHO1Q8TCT1 267 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 ORAI1Q96D31 301 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 TSSK2Q96PF2 358 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.1□□□□□ -0.15
UPF3B-202ENST00000345865 OR2B2Q9GZK3 357 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 PRODH2Q9UF12 536 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 GNG8Q9UK08 70 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 CA14Q9ULX7 337 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 PCNX3Q9H6A9 2034 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 CFAP54Q96N23 3096 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 UNC13CQ8NB66 2214 aa14.1□□□□□ -0.15
UPF3B-202ENST00000345865 A0A087WV48 116 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 TEX13CA0A0J9YWL9 993 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 RAB3BP20337 219 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 IGFBP4P22692 258 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 GRPRP30550 384 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 CCR4P51679 360 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 CLDN20P56880 219 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 SERTAD2Q14140 314 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 TCTE1Q5JU00 501 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 ASB18Q6ZVZ8 466 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 PRR22Q8IZ63 422 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 FAM174AQ8TBP5 190 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 SNX33Q8WV41 574 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 RNF166Q96A37 237 aaPredicted RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 MSANTD3Q96H12 275 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 HSPA12BQ96MM6 686 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 OR14A2Q96R54 314 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 SNX18Q96RF0 628 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 MARVELD1Q9BSK0 173 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 THAP7Q9BT49 309 aaPredicted RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 YIPF2Q9BWQ6 316 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 OR8D2Q9GZM6 311 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 UBQLN4Q9NRR5 601 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 DHCR7Q9UBM7 475 aaKnown RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 CLEC4AQ9UMR7 237 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 ELOA3DA6NLF2 546 aaPredicted RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 CENPXA8MT69 81 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 FZD7O75084 574 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 IL33O95760 270 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 TCEA1P23193 301 aaKnown RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 HLA-DMAP28067 261 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 GALNSP34059 522 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 ADH7P40394 386 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 PITPNBP48739 271 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 GBX2P52951 348 aaPredicted RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 GPR176Q14439 515 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 ZNF74Q16587 644 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 ELOA3BQ3SY89 546 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 WBP2NLQ6ICG8 309 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 FAM122BQ7Z309 247 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 LRRC75AQ8NAA5 344 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 ELOA3Q8NG57 546 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 GPX7Q96SL4 187 aaPredicted RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 HDHD2Q9H0R4 259 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 SLC2A4RGQ9NR83 387 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 PLSCR3Q9NRY6 295 aa14.09□□□□□ -0.15
UPF3B-202ENST00000345865 TP53BP1Q12888 1972 aaPredicted RBP14.09□□□□□ -0.15
UPF3B-202ENST00000345865 TRBV2A0A0J9YWF9 115 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 RGS13O14921 159 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms