RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 YOD1Q5VVQ6 348 aaPredicted RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 LYSMD4Q5XG99 296 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 MZT2BQ6NZ67 158 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 GDPD3Q7L5L3 318 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 TMED4Q7Z7H5 227 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 HSD17B8Q92506 261 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 SHDQ96IW2 340 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 FYTTD1Q96QD9 318 aaKnown RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 AKIRIN1Q9H9L7 192 aaPredicted RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 TAS2R7Q9NYW3 318 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 CNOT2Q9NZN8 540 aaKnown RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 FARSAQ9Y285 508 aaKnown RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 SURF4O15260 269 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 FLRT2O43155 660 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 RENP00797 406 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 ADAM8P78325 824 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 OR1L3Q8NH93 324 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 SLC2A12Q8TD20 617 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 PPP1R14AQ96A00 147 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 KTI12Q96EK9 354 aaPredicted RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 GPER1Q99527 375 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 KLHDC3Q9BQ90 382 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 RXFP3Q9NSD7 469 aa12.21□□□□□ -0.45
CASC4-202ENST00000345795 MRTO4Q9UKD2 239 aaKnown RBP12.21□□□□□ -0.45
CASC4-202ENST00000345795 MED13LQ71F56 2210 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 ZNF264O43296 627 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 IGHV3-9P01782 118 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 EMP2P54851 167 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 HSD11B2P80365 405 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 CCDC80Q76M96 950 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 OR2L13Q8N349 312 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 OR4K17Q8NGC6 315 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 MAFAQ8NHW3 353 aaPredicted RBP12.21□□□□□ -0.46
CASC4-202ENST00000345795 STT3BQ8TCJ2 826 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 ANKRD9Q96BM1 317 aaPredicted RBP12.21□□□□□ -0.46
CASC4-202ENST00000345795 BARHL1Q9BZE3 327 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 NUDT15Q9NV35 164 aa12.21□□□□□ -0.46
CASC4-202ENST00000345795 CYR61O00622 381 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 FPR3P25089 353 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 GMFBP60983 142 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 MLLT11Q13015 90 aaPredicted RBP12.2□□□□□ -0.46
CASC4-202ENST00000345795 SLC25A35Q3KQZ1 300 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 HSD17B12Q53GQ0 312 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 TRIM61Q5EBN2 209 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 RAET1LQ5VY80 246 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 SSX6Q7RTT6 188 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 SLC35F2Q8IXU6 374 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 DERL3Q96Q80 235 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 OR5B2Q96R09 309 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 LPAR4Q99677 370 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 CDCP1Q9H5V8 836 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 PILRAQ9UKJ1 303 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 RARRES3Q9UL19 164 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 PTRH2Q9Y3E5 179 aaKnown RBP12.2□□□□□ -0.46
CASC4-202ENST00000345795 CEP295Q9C0D2 2601 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 NPIPA5E9PKD4 350 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 MT-ND4P03905 459 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 THY1P04216 161 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 PAPD4Q6PIY7 484 aaKnown RBP12.2□□□□□ -0.46
CASC4-202ENST00000345795 NUP54Q7Z3B4 507 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 GID4Q8IVV7 300 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 TOMM5Q8N4H5 51 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 GPBAR1Q8TDU6 330 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 C10orf90Q96M02 699 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 SEMA4CQ9C0C4 833 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 C11orf54Q9H0W9 315 aaPredicted RBP12.2□□□□□ -0.46
CASC4-202ENST00000345795 NT5DC2Q9H857 520 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 B3GAT2Q9NPZ5 323 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 UBQLN4Q9NRR5 601 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 NPIPA1Q9UND3 350 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 SLC35A3Q9Y2D2 325 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 HS3ST3A1Q9Y663 406 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 DENND4CQ5VZ89 1909 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 A0A087WV48 116 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 TLCD2A6NGC4 264 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 METTL12A8MUP2 240 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 FOXS1O43638 330 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 ZNF45Q02386 682 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 CAMK2DQ13557 499 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 ETFDHQ16134 617 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 SCGB2B2Q4G0G5 96 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 ZNF322Q6U7Q0 402 aaPredicted RBP12.2□□□□□ -0.46
CASC4-202ENST00000345795 TMCO6Q96DC7 493 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 ALG12Q9BV10 488 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 PITHD1Q9GZP4 211 aaPredicted RBP12.2□□□□□ -0.46
CASC4-202ENST00000345795 FBRSQ9HAH7 460 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 RANGRFQ9HD47 186 aaPredicted RBP12.2□□□□□ -0.46
CASC4-202ENST00000345795 HSPB11Q9Y547 144 aa12.2□□□□□ -0.46
CASC4-202ENST00000345795 MPDZO75970 2070 aa12.19□□□□□ -0.46
CASC4-202ENST00000345795 MTCL1Q9Y4B5 1905 aaKnown RBP12.19□□□□□ -0.46
CASC4-202ENST00000345795 ZNF318Q5VUA4 2279 aa12.19□□□□□ -0.46
CASC4-202ENST00000345795 TGFBR3LH3BV60 316 aa12.19□□□□□ -0.46
CASC4-202ENST00000345795 SGCAQ16586 387 aa12.19□□□□□ -0.46
CASC4-202ENST00000345795 CREB3L1Q96BA8 519 aa12.19□□□□□ -0.46
CASC4-202ENST00000345795 OMA1Q96E52 524 aa12.19□□□□□ -0.46
CASC4-202ENST00000345795 NUDT9Q9BW91 350 aa12.19□□□□□ -0.46
CASC4-202ENST00000345795 SLC22A4Q9H015 551 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms