RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 KLHL21Q9UJP4 597 aa13.62□□□□□ -0.23
VIPAS39-202ENST00000343765 MTCH2Q9Y6C9 303 aa13.62□□□□□ -0.23
VIPAS39-202ENST00000343765 C17orf51A8MQB3 221 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 SC5DO75845 299 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 OR2T7P0C7T2 308 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 NME1P15531 152 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 GABRA4P48169 554 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 SRP9P49458 86 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 HSD17B7P56937 341 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 CDK5R1Q15078 307 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 KLHL26Q53HC5 615 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 APOOLQ6UXV4 268 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 DPY19L2P2Q6ZN68 376 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 TRILQ7L0X0 811 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 OR4D9Q8NGE8 314 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 OR2T27Q8NH04 317 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 ZNF524Q96C55 264 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 KCNJ15Q99712 375 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 THAP7Q9BT49 309 aaPredicted RBP13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 NRSN2Q9GZP1 204 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 NXF5Q9H1B4 397 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 RPRD1BQ9NQG5 326 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 NCDNQ9UBB6 729 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 NOX1Q9Y5S8 564 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 THADAQ6YHU6 1953 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 MPDZO75970 2070 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 CD53P19397 219 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 MAGEB1P43366 347 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 PITPNBP48739 271 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 AGFG1P52594 562 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 SIRPAP78324 504 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 LGALS3BPQ08380 585 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 RIN1Q13671 783 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 BCL2A1Q16548 175 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 CMIPQ8IY22 773 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 ZSCAN1Q8NBB4 408 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 RFT1Q96AA3 541 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 SMIM19Q96E16 107 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 ABHD1Q96SE0 405 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 GDF15Q99988 308 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 BRD7Q9NPI1 651 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 PRODH2Q9UF12 536 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 ICAM5Q9UMF0 924 aa13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 AK6Q9Y3D8 172 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-202ENST00000343765 H7C1C5 153 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 PPM1BO75688 479 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 F13BP05160 661 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 FAM157BP0CG42 384 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 UBL4AP11441 157 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ATF1P18846 271 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 SDHBP21912 280 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 PTBP1P26599 531 aaKnown RBP eCLIP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 DIO1P49895 249 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 LCN6P62502 163 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ACTA2P62736 377 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ACTG2P63267 376 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 GPR176Q14439 515 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 MTFR2Q6P444 385 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 TPRA1Q86W33 373 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 MS4A15Q8N5U1 240 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 POMGNT2Q8NAT1 580 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ZNF511Q8NB15 262 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ADAMTS18Q8TE60 1221 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 PTPMT1Q8WUK0 201 aaPredicted RBP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ADOQ96SZ5 270 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 UCKL1Q9NWZ5 548 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 TMEM131Q92545 1883 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 A0A087WV48 116 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 SCDO00767 359 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 FZD7O75084 574 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 NPR2P20594 1047 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 CDKN2AP42771 156 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 GRK6P43250 576 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 DUSP18Q8NEJ0 188 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 OR14A16Q8NHC5 309 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 KCTD12Q96CX2 325 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ZFP3Q96NJ6 502 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ABCG5Q9H222 651 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 GALNT9Q9HCQ5 603 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 NRIP3Q9NQ35 241 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 TLCD2A6NGC4 264 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 OR6C70A6NIJ9 312 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 CPNE3O75131 537 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 UTS2O95399 124 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 TRAPPC2P0DI81 140 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 TRAPPC2BP0DI82 140 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 GLULP15104 373 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 RBMS1P29558 406 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 CLDN20P56880 219 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ZNF563Q8TA94 476 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ZC3HAV1LQ96H79 300 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 SNX18Q96RF0 628 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 UBL7Q96S82 380 aaPredicted RBP13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 SLC25A18Q9H1K4 315 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 NANSQ9NR45 359 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 UBQLN4Q9NRR5 601 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 GMEB2Q9UKD1 530 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 ITGB1BP2Q9UKP3 347 aa13.6□□□□□ -0.23
VIPAS39-202ENST00000343765 FREM2Q5SZK8 3169 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms