RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 STATHP02808 62 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF35P13682 527 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HMGA2P52926 109 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HSPB2Q16082 182 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 RNF212Q495C1 297 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CLLU1OSQ5K130 101 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 C6orf132Q5T0Z8 1188 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM244Q5VVB8 128 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LKAAEAR1Q8TD35 194 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HIST1H2AAQ96QV6 131 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MCCC2Q9HCC0 563 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ASB1Q9Y576 335 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NME7Q9Y5B8 376 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TO15178 435 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 RAB6AP20340 208 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 DAP3P51398 398 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 DHCR24Q15392 516 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NKPD1Q17RQ9 610 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 C18orf63Q68DL7 685 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 DNAAF1Q8NEP3 725 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 FBLIM1Q8WUP2 373 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 EDAQ92838 391 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 NOX4Q9NPH5 578 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 OR5K4A6NMS3 321 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TAAR5O14804 337 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SCO1O75880 301 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 IFNA10P01566 189 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 IFNA4P05014 189 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ITGB7P26010 798 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 BDKRB2P30411 391 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A1P30531 599 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PDZK1IP1Q13113 114 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CAMK2BQ13554 666 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 TDGQ13569 410 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 KIAA0040Q15053 153 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 P2RY14Q15391 338 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF674Q2M3X9 581 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PRSS45Q7RTY3 260 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SMIM4Q8WVI0 70 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CXCL16Q9H2A7 254 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HRASLSQ9HDD0 168 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A13Q9NSD5 602 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CBLCQ9ULV8 474 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 HHLA2Q9UM44 414 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 WNT6Q9Y6F9 365 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MED6O75586 246 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 JTBO76095 146 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SIX6O95475 246 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SBK2P0C263 348 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CNR1P21554 472 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RFX2P48378 723 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RAB13P51153 203 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SCAND1P57086 179 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FOXK2Q01167 660 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 GPR18Q14330 331 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF628Q5EBL2 1059 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FAM209AQ5JX71 171 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FAM124AQ86V42 546 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CCDC54Q8NEL0 328 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 MALSU1Q96EH3 234 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC25A18Q9H1K4 315 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A20Q9NP91 592 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 EXOSC3Q9NQT5 275 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 DLL4Q9NR61 685 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FAM86C1Q9NVL1 165 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PRELID3BQ9Y3B1 194 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 LOC100289279A0A1B0GTE1 492 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SOCS6O14544 535 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 APBB3O95704 486 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FUT1P19526 365 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RAB33AQ14088 237 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FXNQ16595 210 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM64Q6YI46 380 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 DPY19L2P2Q6ZN68 376 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 OR51L1Q8NGJ5 315 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 UPRTQ96BW1 309 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM121BQ9BXQ6 578 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZMAT5Q9UDW3 170 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RNH1P13489 461 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PSMB10P40306 273 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 C21orf58P58505 322 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM225Q6GV28 225 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 VRK3Q8IV63 474 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZBTB44Q8NCP5 570 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 NUDT8Q8WV74 236 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 GLIPR2Q9H4G4 154 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 MED20Q9H944 212 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TAS2R5Q9NYW4 299 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 KCNK6Q9Y257 313 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FAM230AA0A1W2PPH8 454 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 IFITM5A6NNB3 132 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ADAM10O14672 748 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CDC123O75794 336 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 INHAP05111 366 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF41P51814 821 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 EGR3Q06889 387 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 MFGE8Q08431 387 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 DUSP8Q13202 625 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TEAD2Q15562 447 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms