RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 UMODP07911 640 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 TSPAN19P0C672 248 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 HK1P19367 917 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 IL11P20809 199 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 PSMD7P51665 324 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 PNLIPRP2P54317 469 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS18P62269 152 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 C1DQ13901 141 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF404Q494X3 552 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 CRTC2Q53ET0 693 aaPredicted RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 RNLSQ5VYX0 342 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ADGRG3Q86Y34 549 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 GALNT6Q8NCL4 622 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 GPR119Q8TDV5 335 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 MR1Q95460 341 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 FOXN4Q96NZ1 517 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 DDOQ99489 341 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 BCL7BQ9BQE9 202 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 PRRG3Q9BZD7 231 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 LAT2Q9GZY6 243 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 PPIL3Q9H2H8 161 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 POLE4Q9NR33 117 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 CHCHD3Q9NX63 227 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 VDAC3Q9Y277 283 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 OTOGLQ3ZCN5 2332 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 TEX13CA0A0J9YWL9 993 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 TTC36A6NLP5 189 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 SNTNA6NMZ2 147 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 CLDN25C9JDP6 229 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 NCR1O76036 304 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 PLGP00747 810 aaPredicted RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 SBK2P0C263 348 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ASAH2BP0C7U1 165 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF3P17036 446 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 PAICSP22234 425 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC6A6P31641 620 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 PYCR1P32322 319 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 SDC2P34741 201 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 UGT2B10P36537 528 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 DCAF7P61962 342 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS4XP62701 263 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 E2F1Q01094 437 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 RPL18Q07020 188 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 QPRTQ15274 297 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 COL28A1Q2UY09 1125 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 FAM27D1Q5T7N8 215 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF322Q6U7Q0 402 aaPredicted RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ACBD7Q8N6N7 88 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF511Q8NB15 262 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 AGBL5Q8NDL9 886 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ATP6V1C2Q8NEY4 427 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 OR10G3Q8NGC4 313 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 OR5M1Q8NGP8 315 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC35B4Q969S0 331 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 SMAD5Q99717 465 aaKnown RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 ALG8Q9BVK2 526 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 NRIP3Q9NQ35 241 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 FBXO4Q9UKT5 387 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 CD8B2A6NJW9 211 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 J3QLW9 94 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 CDX4O14627 284 aaPredicted RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 SELENOFO60613 162 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 CDRT1O95170 752 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 LDOC1O95751 146 aaPredicted RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 SYPP08247 313 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 CD8BP10966 210 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 FGF5P12034 268 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF19P17023 458 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 ENDOUP21128 410 aaKnown RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 AVPR2P30518 371 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 CTXN1P60606 82 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF85Q03923 595 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 C19orf57Q0VDD7 668 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 ATP1A4Q13733 1029 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 WDFY1Q8IWB7 410 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 C17orf47Q8NEP4 570 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 OR6K6Q8NGW6 343 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 OR5W2Q8NH69 310 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 SMPDL3BQ92485 455 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 BORCS5Q969J3 196 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 ARL5BQ96KC2 179 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 TMUB1Q9BVT8 246 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 COL25A1Q9BXS0 654 aaPredicted RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 SRA1Q9HD15 236 aaKnown RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 RPRD1BQ9NQG5 326 aaKnown RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 EXOSC3Q9NQT5 275 aaKnown RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 TAS2R5Q9NYW4 299 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 MRTO4Q9UKD2 239 aaKnown RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 STUB1Q9UNE7 303 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 EXOSC1Q9Y3B2 195 aaKnown RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 PTRH2Q9Y3E5 179 aaKnown RBP6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF337Q9Y3M9 751 aa6.71□□□□□ -1.33
SRFBP1-201ENST00000339397 MGAQ8IWI9 3026 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1W2PNU3 283 aaPredicted RBP6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 DAPL1A0PJW8 107 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 TMEM72A0PK05 275 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 OR6C70A6NIJ9 312 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 PRR32B1ATL7 298 aa6.71□□□□□ -1.34
SRFBP1-201ENST00000339397 CPNE3O75131 537 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms