RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ARSKQ6UWY0 536 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 ZNF485Q8NCK3 441 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 PSD4Q8NDX1 1056 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 OR10H4Q8NGA5 316 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 ZNRF4Q8WWF5 429 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 SLIRPQ9GZT3 109 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 ISG20L2Q9H9L3 353 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 NDUFB11Q9NX14 153 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 TEX13CA0A0J9YWL9 993 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 CYC1P08574 325 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 INHBBP09529 407 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 JMJD7P0C870 316 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 FOLR3P41439 243 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 POLR2HP52434 150 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 RPL18Q07020 188 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 USP43Q70EL4 1123 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 NUP54Q7Z3B4 507 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 SLC43A2Q8N370 569 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 SPRYD4Q8WW59 207 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 ZMYND19Q96E35 227 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 IMMP1LQ96LU5 166 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 ARHGAP9Q9BRR9 750 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 TOR4AQ9NXH8 423 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 PADI1Q9ULC6 663 aa20.35■□□□□ 0.85
PDLIM2-203ENST00000339162 KMT2EQ8IZD2 1858 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 A0A1W2PNU3 283 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 PSMA1P25786 263 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 OPRL1P41146 370 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 CRYBB2P43320 205 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 CTXN1P60606 82 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 NANOGNBQ7Z5D8 188 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 ACBD7Q8N6N7 88 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 OR11G2Q8NGC1 345 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 SLC22A8Q8TCC7 542 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 LIPHQ8WWY8 451 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 ZNF700Q9H0M5 742 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 TMEM9BQ9NQ34 198 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 OR6C68A6NDL8 312 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 SHISA8B8ZZ34 492 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 ITGA10O75578 1167 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 IGF2P01344 180 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 CPEP16870 476 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 NAGAP17050 411 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 TCN2P20062 427 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 TCEA1P23193 301 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 HCCSP53701 268 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 DCTN2Q13561 401 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 MOGQ16653 247 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 TIMM50Q3ZCQ8 353 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 GRINAQ7Z429 371 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 MISPQ8IVT2 679 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 KLHL36Q8N4N3 616 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 LRRC75AQ8NAA5 344 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 NPEPL1Q8NDH3 523 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 METTL7AQ9H8H3 244 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 ADGRL4Q9HBW9 690 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 ZNF160Q9HCG1 818 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 ASB6Q9NWX5 421 aa20.34■□□□□ 0.85
PDLIM2-203ENST00000339162 UQCRC1P31930 480 aa20.33■□□□□ 0.85
PDLIM2-203ENST00000339162 TMED10P49755 219 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-203ENST00000339162 RAB15P59190 212 aa20.33■□□□□ 0.85
PDLIM2-203ENST00000339162 DHRS13Q6UX07 377 aa20.33■□□□□ 0.85
PDLIM2-203ENST00000339162 SLC15A4Q8N697 577 aa20.33■□□□□ 0.85
PDLIM2-203ENST00000339162 TTC9Q92623 222 aa20.33■□□□□ 0.85
PDLIM2-203ENST00000339162 PTDSS2Q9BVG9 487 aa20.33■□□□□ 0.85
PDLIM2-203ENST00000339162 TRAV36DV7A0A075B6V5 113 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 DAPL1A0PJW8 107 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 PLD2O14939 933 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 ARPC3O15145 178 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 BGLAPP02818 100 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 HIST1H2ABP04908 130 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 SBK2P0C263 348 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 FBXO45P0C2W1 286 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 UGT2B10P36537 528 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 PTGDSP41222 190 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 HIST3H2AQ7L7L0 130 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 HIST1H2ACQ93077 130 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 SPACA9Q96E40 222 aaPredicted RBP20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 GPX7Q96SL4 187 aaPredicted RBP20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 TM9SF2Q99805 663 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 TTTY10Q9BZA0 68 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 OCEL1Q9H607 264 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 KLHL21Q9UJP4 597 aa20.33■□□□□ 0.84
PDLIM2-203ENST00000339162 ANKUB1A6NFN9 424 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 FAM171A2A8MVW0 826 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 J3QRK9 145 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 PRKCAP17252 672 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 CDKN2AP42771 156 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 RPS25P62851 125 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 LEG1Q6P5S2 330 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 C6orf15Q6UXA7 325 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 IL20RBQ6UXL0 311 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 KLBQ86Z14 1044 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 LSM14AQ8ND56 463 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 ATP6V1C2Q8NEY4 427 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 KBTBD8Q8NFY9 601 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 SMPDL3BQ92485 455 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 TAAR9Q96RI9 348 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 TIMP4Q99727 224 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 ALG8Q9BVK2 526 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms