RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 NEURL3Q96EH8 262 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 PIMREGQ9BSJ6 248 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 C19orf24Q9BVV8 132 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 MEAF6Q9HAF1 191 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 OSGIN1Q9UJX0 560 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 MOKQ9UQ07 419 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 TMED7Q9Y3B3 224 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 ARFGEF3Q5TH69 2177 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 LOC100289279A0A1B0GTE1 492 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 VWC2LB2RUY7 222 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 J3QL48 77 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 AP3D1O14617 1153 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 SNUPNO95149 360 aaKnown RBP13.65□□□□□ -0.22
LINC01116-202ENST00000339037 ALDOCP09972 364 aaKnown RBP13.65□□□□□ -0.22
LINC01116-202ENST00000339037 IMPDH2P12268 514 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 UQCRBP14927 111 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 LBPP18428 481 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 CDH2P19022 906 aaPredicted RBP13.65□□□□□ -0.22
LINC01116-202ENST00000339037 TACR3P29371 465 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 MAP2K6P52564 334 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 SNRPD2P62316 118 aaKnown RBP13.65□□□□□ -0.22
LINC01116-202ENST00000339037 LSRQ86X29 649 aaPredicted RBP13.65□□□□□ -0.22
LINC01116-202ENST00000339037 CMIPQ8IY22 773 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 SORCS2Q96PQ0 1159 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
LINC01116-202ENST00000339037 PGPEP1Q9NXJ5 209 aa13.65□□□□□ -0.22
LINC01116-202ENST00000339037 MARCOQ9UEW3 520 aaPredicted RBP13.65□□□□□ -0.22
LINC01116-202ENST00000339037 TMEM72A0PK05 275 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 ZC3H12DA2A288 527 aaKnown RBP13.64□□□□□ -0.23
LINC01116-202ENST00000339037 E9PBE3 544 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 SDHDO14521 159 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 KLF11O14901 512 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 HNF1AP20823 631 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 SLC1A3P43003 542 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 NR4A2P43354 598 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 NME5P56597 212 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 WDR4P57081 412 aaKnown RBP13.64□□□□□ -0.23
LINC01116-202ENST00000339037 CASP8Q14790 479 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 MST1LQ2TV78 715 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 FAM174BQ3ZCQ3 159 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 HIKESHIQ53FT3 197 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 FAM120AOSQ5T036 256 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 OTUD3Q5T2D3 398 aaPredicted RBP13.64□□□□□ -0.23
LINC01116-202ENST00000339037 OGFOD2Q6N063 350 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 IL17RELQ6ZVW7 336 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 ANKRD42Q8N9B4 389 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 POMGNT2Q8NAT1 580 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 TMEM45BQ96B21 275 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 C3orf49Q96BT1 292 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 MSI2Q96DH6 328 aaKnown RBP13.64□□□□□ -0.23
LINC01116-202ENST00000339037 TRNT1Q96Q11 434 aaKnown RBP13.64□□□□□ -0.23
LINC01116-202ENST00000339037 SLC35A5Q9BS91 424 aa13.64□□□□□ -0.23
LINC01116-202ENST00000339037 LOC390937A0A1W2PQ73 354 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 PRAMEF27A3QJZ7 478 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 SLC35F4A4IF30 521 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 AGAP5A6NIR3 686 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 HMGN4O00479 90 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 GPIP06744 558 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
LINC01116-202ENST00000339037 SERPINF1P36955 418 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 CLNS1AP54105 237 aaKnown RBP13.63□□□□□ -0.23
LINC01116-202ENST00000339037 UFM1P61960 85 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 GNA13Q14344 377 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 CARTPTQ16568 116 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 DPY19L1Q2PZI1 675 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 HHATQ5VTY9 493 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 AAED1Q7RTV5 226 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 SLC46A3Q7Z3Q1 461 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 ABHD12BQ7Z5M8 362 aaPredicted RBP13.63□□□□□ -0.23
LINC01116-202ENST00000339037 GPAT4Q86UL3 456 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 KIRREL3Q8IZU9 778 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 OR9K2Q8NGE7 335 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 KCNS3Q9BQ31 491 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 SF3B5Q9BWJ5 86 aaKnown RBP13.63□□□□□ -0.23
LINC01116-202ENST00000339037 SLC38A1Q9H2H9 487 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 MYOZ1Q9NP98 299 aaPredicted RBP13.63□□□□□ -0.23
LINC01116-202ENST00000339037 OBP2BQ9NPH6 170 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 CA10Q9NS85 328 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 AIG1Q9NVV5 245 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 TENM1Q9UKZ4 2725 aa13.63□□□□□ -0.23
LINC01116-202ENST00000339037 IGHV4-61A0A0C4DH41 118 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 TMEM120BA0PK00 339 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 CFAP73A6NFT4 308 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 FAAHO00519 579 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 KRT33AO76009 404 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 AKR7A3O95154 331 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 IL12AP29459 219 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 SRSF2Q01130 221 aaKnown RBP13.62□□□□□ -0.23
LINC01116-202ENST00000339037 CEACAM7Q14002 265 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 SYPL1Q16563 259 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 SPATA19Q7Z5L4 167 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 RNF130Q86XS8 419 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 TMEM99Q8N816 258 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 ANKS4BQ8N8V4 417 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 ANKFN1Q8N957 763 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 ZIC4Q8N9L1 334 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 MGARPQ8TDB4 240 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 WDR60Q8WVS4 1066 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms