RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CELA3AP09093 270 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 RFPL3SP0C7P2 107 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF24P17028 368 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 GABRB1P18505 474 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 FUT4P22083 530 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 EVI2BP34910 448 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 SLC1A3P43003 542 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 HTR3AP46098 478 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 SLC35A2P78381 396 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 C17orf67Q0P5P2 114 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 CBFBQ13951 182 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 OCLNQ16625 522 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 SLC22A10Q63ZE4 541 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 TMEM81Q6P7N7 255 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 C5orf46Q6UWT4 87 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 CCDC71Q8IV32 467 aaPredicted RBP14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 FAM26EQ8N5C1 309 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 BPIFB6Q8NFQ5 453 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 OR5W2Q8NH69 310 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 RNF138Q8WVD3 245 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 BPIFA2Q96DR5 249 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 ARSGQ96EG1 525 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 NODALQ96S42 347 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 SECISBP2Q96T21 854 aaKnown RBP14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 DEFB127Q9H1M4 99 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 HRH3Q9Y5N1 445 aa14.88□□□□□ -0.03
PDLIM1-201ENST00000329399 ADGRG4Q8IZF6 3080 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 FREM3P0C091 2139 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 IRGMA1A4Y4 181 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 EFCAB10A6NFE3 127 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 CDC40O60508 579 aaKnown RBP eCLIP14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 HCN1O60741 890 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 WBP4O75554 376 aaKnown RBP14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 GLSO94925 669 aaPredicted RBP14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 BMP7P18075 431 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 P2RX1P51575 399 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 MAP2K6P52564 334 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 SNTA1Q13424 505 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 GINS1Q14691 196 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 C1QL3Q5VWW1 255 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 LAIR2Q6ISS4 152 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF620Q6ZNG0 422 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 PRSS48Q7RTY5 328 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 OR52L1Q8NGH7 329 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 CNIH3Q8TBE1 160 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 NTNG2Q96CW9 530 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 DGCR14Q96DF8 476 aaKnown RBP14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 FAM46AQ96IP4 442 aaKnown RBP14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 TTTY12Q9BZ98 90 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 SACM1LQ9NTJ5 587 aa14.87□□□□□ -0.03
PDLIM1-201ENST00000329399 NCKAP5O14513 1909 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 CELSR2Q9HCU4 2923 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 C2orf72A6NCS6 295 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 LRRC3CA6NJW4 275 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 CLCA1A8K7I4 914 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 TP53I11O14683 189 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 LRRTM2O43300 516 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 FAM20BO75063 409 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 STSP08842 583 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 PIPP12273 146 aaPredicted RBP14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 IFI30P13284 250 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 PCYT1AP49585 367 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 PPIAP62937 165 aaKnown RBP14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 CD226Q15762 336 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 CADM2Q8N3J6 435 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 TMEM251Q8N6I4 163 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF540Q8NDQ6 660 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 OR2T33Q8NG76 320 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 RNF217Q8TC41 542 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 LIPHQ8WWY8 451 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 TMEM234Q8WY98 164 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 HGDQ93099 445 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 C3orf49Q96BT1 292 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 FAM173AQ9BQD7 235 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 NDEL1Q9GZM8 345 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 ADAM19Q9H013 955 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 RASSF1Q9NS23 344 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF226Q9NYT6 803 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 CARD8Q9Y2G2 431 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 RPL36Q9Y3U8 105 aaKnown RBP14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 LIPGQ9Y5X9 500 aa14.86□□□□□ -0.03
PDLIM1-201ENST00000329399 ELOA3DA6NLF2 546 aaPredicted RBP14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 EFCAB9A8MZ26 197 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 RGS10O43665 173 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 AGFG2O95081 481 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 P04436 131 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 DLX5P56178 289 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 FOXD4Q12950 439 aaPredicted RBP14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 ELOA3BQ3SY89 546 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 ZBED5Q49AG3 693 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 APOOLQ6UXV4 268 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 TMCO5AQ8N6Q1 288 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 FAM98AQ8NCA5 519 aaKnown RBP14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 ELOA3Q8NG57 546 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 B4GALNT2Q8NHY0 566 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF563Q8TA94 476 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 APH1BQ8WW43 257 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 FCGR1BQ92637 280 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 GPA33Q99795 319 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 TBC1D23Q9NUY8 699 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms