RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 SERTM1A2A2V5 107 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 THBS1P07996 1170 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 EEF1A1P5Q5VTE0 462 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 NKAIN2Q5VXU1 208 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 GALNT9Q9HCQ5 603 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 RPH3AQ9Y2J0 694 aaPredicted RBP12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 CENPBD1B2RD01 187 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 ARSBP15848 533 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 CPEP16870 476 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 ZNF43P17038 809 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 ACTBP60709 375 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 ACTG1P63261 375 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 HTRA4P83105 476 aaPredicted RBP12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 DUSP8Q13202 625 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 MFSD13AQ14CX5 517 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 AGERQ15109 404 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 NKAPLQ5M9Q1 402 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 GPR139Q6DWJ6 353 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 SYT9Q86SS6 491 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 BEST3Q8N1M1 668 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 OR5J2Q8NH18 312 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 FYTTD1Q96QD9 318 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 FKBP14Q9NWM8 211 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 MUTYHQ9UIF7 546 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 SLC17A4Q9Y2C5 497 aa12.73□□□□□ -0.37
DNMT3B-202ENST00000328111 ARPC5O15511 151 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 LINC01565O15544 149 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SYT7O43581 403 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SYPP08247 313 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 DRD3P35462 400 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 MESP2Q0VG99 397 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 METTL11BQ5VVY1 283 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 ZNF767PQ75MW2 155 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 FAM160A2Q8N612 972 aaPredicted RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SLC22A8Q8TCC7 542 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 WDR34Q96EX3 536 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 STACQ99469 402 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 TRIOBPQ9H2D6 2365 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 MEGF11A6BM72 1044 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 F5H0A9 414 aaPredicted RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 CD14P08571 375 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SNTA1Q13424 505 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SF3B4Q15427 424 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■■■□ 22.8
DNMT3B-202ENST00000328111 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SCGB3A2Q96PL1 93 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 NEURL2Q9BR09 285 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SLA2Q9H6Q3 261 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 WSB2Q9NYS7 404 aaPredicted RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 MEMO1Q9Y316 297 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 PCDHGA3Q9Y5H0 932 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 HCRTR1O43613 425 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 NARSO43776 548 aaKnown RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 GALR3O60755 368 aaPredicted RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 RBMXL2O75526 392 aaKnown RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 RAB3DO95716 219 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 PRH1P02810 166 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 RBMS1P29558 406 aaKnown RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SSTR2P30874 369 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 PCBP3P57721 371 aaKnown RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 CBFBQ13951 182 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 GRK1Q15835 563 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 ETFBKMTQ8IXQ9 262 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 FAM46BQ96A09 425 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 RSPRY1Q96DX4 576 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 SLC25A44Q96H78 314 aaPredicted RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 FAM71F1Q96KD3 344 aaPredicted RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 CMC2Q9NRP2 79 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 ABI3Q9P2A4 366 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 UNC13CQ8NB66 2214 aa12.72□□□□□ -0.37
DNMT3B-202ENST00000328111 EFCAB7A8K855 629 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 SEC14L5O43304 696 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 PLRG1O43660 514 aaKnown RBP12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 GATBO75879 557 aaKnown RBP12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 KCNK2O95069 426 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 HMGA2P52926 109 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 ACY1Q03154 408 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 TPBGQ13641 420 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 APOOLQ6UXV4 268 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 BAHD1Q8TBE0 780 aaPredicted RBP12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 APH1BQ8WW43 257 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 PNPLA2Q96AD5 504 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 OR5B2Q96R09 309 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 CHST2Q9Y4C5 530 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 SELENOFO60613 162 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 DPM1O60762 260 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 RFPL3O75679 317 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 SCGB1D2O95969 90 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 IFNA21P01568 189 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 GDNFP39905 211 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 BTG2P78543 158 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 SPOCK1Q08629 439 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 PMM1Q92871 262 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 LRRC3BQ96PB8 259 aa12.71□□□□□ -0.37
DNMT3B-202ENST00000328111 URM1Q9BTM9 101 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms