RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 RPE65Q16518 533 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 ZNF322Q6U7Q0 402 aaPredicted RBP7.39□□□□□ -1.23
CIITA-201ENST00000324288 TVP23CQ96ET8 276 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 DCBLD2Q96PD2 775 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 HRASLSQ9HDD0 168 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 HSFX1Q9UBD0 423 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 MYLKQ15746 1914 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 SLC22A23A1A5C7 686 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 J3KTA2 159 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 CPT2P23786 658 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 CDONQ4KMG0 1287 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 PRSS45Q7RTY3 260 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 LAX1Q8IWV1 398 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 SKA3Q8IX90 412 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 TTC9BQ8N6N2 239 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 SFXN5Q8TD22 340 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 IGSF21Q96ID5 467 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 GPR62Q9BZJ7 368 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 TMEM82A0PJX8 343 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 C1orf226A1L170 272 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 ZFP92A6NM28 416 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 TUSC2O75896 110 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 WDR5P61964 334 aaKnown RBP7.39□□□□□ -1.23
CIITA-201ENST00000324288 RPL11P62913 178 aaKnown RBP7.39□□□□□ -1.23
CIITA-201ENST00000324288 RUNX2Q13950 521 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 MEF2DQ14814 521 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 NANOS1Q8WY41 292 aaKnown RBP7.39□□□□□ -1.23
CIITA-201ENST00000324288 SLC39A9Q9NUM3 307 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 DCAF13Q9NV06 445 aaKnown RBP7.39□□□□□ -1.23
CIITA-201ENST00000324288 TRAV20A0A0B4J274 112 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 METTL15A6NJ78 407 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 OR52A4PA6NMU1 304 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 GABRPO00591 440 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 JRKO75564 520 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 KCNE1P15382 129 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 SLC1A3P43003 542 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 ERV3-1Q14264 604 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 TMEM201Q5SNT2 666 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 ABHD17BQ5VST6 288 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 ZNF852Q6ZMS4 543 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 CPEB2Q7Z5Q1 589 aaKnown RBP7.39□□□□□ -1.23
CIITA-201ENST00000324288 SERINC2Q96SA4 455 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 OR10A5Q9H207 317 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 OR10A2Q9H208 303 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 ENPP4Q9Y6X5 453 aa7.39□□□□□ -1.23
CIITA-201ENST00000324288 XRN1Q8IZH2 1706 aaKnown RBP7.39□□□□□ -1.23
CIITA-201ENST00000324288 CLDN1O95832 211 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GDF1P27539 372 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 CST6Q15828 149 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SLC35G1Q2M3R5 365 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 AADACL3Q5VUY0 350 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 TIPARPQ7Z3E1 657 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 OR5D18Q8NGL1 313 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ZNF778Q96MU6 729 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 EMC7Q9NPA0 242 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ADGRB1O14514 1584 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 NME1P15531 152 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 FOLR3P41439 243 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 NDUFAF7Q7L592 441 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 FAM122BQ7Z309 247 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ISCA2Q86U28 154 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 TCEAL8Q8IYN2 117 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 TMEM123Q8N131 208 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ADAMTS16Q8TE57 1224 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 MKS1Q9NXB0 559 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GABRQQ9UN88 632 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GAPDHSO14556 408 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 LEXMQ3ZCV2 418 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 RNF175Q8N4F7 328 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 FRMD1Q8N878 549 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SUMF1Q8NBK3 374 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 MS4A4EQ96PG1 132 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SULT2B1O00204 365 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SLC31A2O15432 143 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 S1PR4O95977 384 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 NFYAP23511 347 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 HOXD11P31277 338 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 CPOXP36551 454 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 PDZK1IP1Q13113 114 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 CCNJQ5T5M9 372 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 C12orf57Q99622 126 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SPACA1Q9HBV2 294 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 CCSO14618 274 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SEMA4FO95754 770 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 HLA-DOBP13765 273 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GM2AP17900 193 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 NPY4RP50391 375 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 RPP30P78346 268 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 SLC7A9P82251 487 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 EXOSC6Q5RKV6 272 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 ARPC5LQ9BPX5 153 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ABCC6O95255 1503 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 KDM4EB2RXH2 506 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 ANGPTL7O43827 346 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GDNFP39905 211 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 TAS2R30P59541 319 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 NPY5RQ15761 445 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 C11orf42Q8N5U0 333 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 TMEM217Q8N7C4 229 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 BPIFCQ8NFQ6 507 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms