RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 CA5BQ9Y2D0 317 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 KCNE3Q9Y6H6 103 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 TSPAN11A1L157 253 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 SEMA4FO95754 770 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 EIF4EP06730 217 aaKnown RBP13.63□□□□□ -0.23
TCOF1-201ENST00000323668 OC90Q02509 493 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-201ENST00000323668 ZMYND11Q15326 602 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 TANGO2Q6ICL3 276 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 DPY19L2P2Q6ZN68 376 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 TMEM106AQ96A25 262 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 UBQLN4Q9NRR5 601 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 EMC3Q9P0I2 261 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 C17orf105B2RV13 164 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 AQP2P41181 271 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF511Q8NB15 262 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 STOML3Q8TAV4 291 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 DCLRE1CQ96SD1 692 aaKnown RBP13.63□□□□□ -0.23
TCOF1-201ENST00000323668 STACQ99469 402 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 OR2S2Q9NQN1 319 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 NCDNQ9UBB6 729 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 SRPX2O60687 465 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 ERCC1P07992 297 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 S100GP29377 79 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 SLC6A8P48029 635 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 FAM27D1Q5T7N8 215 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 TMEM215Q68D42 235 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 GIMAP5Q96F15 307 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 LIN7BQ9HAP6 207 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 FGF22Q9HCT0 170 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 CYSLTR2Q9NS75 346 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 PLEKHB1Q9UF11 243 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 TEX13DA0A0J9YY54 714 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 CA3P07451 260 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 THEGLP0DJG4 465 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 GABRB1P18505 474 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 RAB38P57729 211 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 FBXO42Q6P3S6 717 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 ALKAL2Q6UX46 152 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 C12orf45Q8N5I9 185 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 ADOQ96SZ5 270 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 GPR174Q9BXC1 333 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 KIR3DX1Q9H7L2 352 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 MYEF2Q9P2K5 600 aaKnown RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 GPN3Q9UHW5 284 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 MOKQ9UQ07 419 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 NUPL2O15504 423 aaKnown RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 SULT1B1O43704 296 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 AKR1C4P17516 323 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 SOX9P48436 509 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 CHAF1BQ13112 559 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 HTR4Q13639 388 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 ABCA11PQ4W5N1 156 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 YIF1BQ5BJH7 314 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 OVCH1Q7RTY7 1134 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 SYT9Q86SS6 491 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 EID2Q8N6I1 236 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 OR4Q3Q8NH05 313 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 GPATCH2Q9NW75 528 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 C14orf166Q9Y224 244 aaKnown RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 WRBO00258 174 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 DNAJB6O75190 326 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 RAF1P04049 648 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 NR2C1P13056 603 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 GPR18Q14330 331 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 NSDHLQ15738 373 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 LNX2Q8N448 690 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 HCAR1Q9BXC0 346 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 NXF2Q9GZY0 626 aaKnown RBP13.62□□□□□ -0.23
TCOF1-201ENST00000323668 GLS2Q9UI32 602 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 V9GYH0 126 aa13.62□□□□□ -0.23
TCOF1-201ENST00000323668 SERINC4A6NH21 518 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 RGS13O14921 159 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 SLC35E2P0CK97 266 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 AMER3Q8N944 861 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 OR6N1Q8NGY5 312 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 PMM1Q92871 262 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 MRGPRX3Q96LB0 322 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 BARHL1Q9BZE3 327 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 POT1Q9NUX5 634 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 HRO43593 1189 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 PROS1P07225 676 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 GLO1Q04760 184 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ERV3-1Q14264 604 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 FBXL6Q8N531 539 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF680Q8NEM1 530 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 RADILQ96JH8 1075 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 SEC22CQ9BRL7 303 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 URM1Q9BTM9 101 aaKnown RBP13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ELOVL3Q9HB03 270 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 GABARAPH6UMI1 98 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 CSTBP04080 98 aaKnown RBP13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF41P51814 821 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-201ENST00000323668 LILRA6Q6PI73 481 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 GPAT4Q86UL3 456 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 DDOQ99489 341 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 SIRT3Q9NTG7 399 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-201ENST00000323668 RBM7Q9Y580 266 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms