RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 RSPO3Q9BXY4 272 aaPredicted RBP10.81□□□□□ -0.68
TPM3-204ENST00000323144 ADAM19Q9H013 955 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 MANSC1Q9H8J5 431 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 SEC61A2Q9H9S3 476 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 TPT1P8Q9HAU6 139 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 BARX1Q9HBU1 254 aaPredicted RBP10.81□□□□□ -0.68
TPM3-204ENST00000323144 SDR39U1Q9NRG7 319 aaPredicted RBP10.81□□□□□ -0.68
TPM3-204ENST00000323144 CBLN4Q9NTU7 201 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 ZIM2Q9NZV7 527 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 UPB1Q9UBR1 384 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 DCTN4Q9UJW0 460 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 AMDHD2Q9Y303 409 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 ARFGEF3Q5TH69 2177 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
TPM3-204ENST00000323144 CD5LO43866 347 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 GPRIN2O60269 458 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 EIF1BO60739 113 aaKnown RBP10.8□□□□□ -0.68
TPM3-204ENST00000323144 ANP32DO95626 131 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 LGI1O95970 557 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 IL6P05231 212 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 GPIP06744 558 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 TFPTP0C1Z6 253 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 ZNF16P17020 682 aaPredicted RBP10.8□□□□□ -0.68
TPM3-204ENST00000323144 SELENOPP49908 381 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 FABP6P51161 128 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 TUBA1BP68363 451 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 TUBA4AP68366 448 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 LRRC74AQ0VAA2 488 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 NRF1Q16656 503 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 ATG16L1Q676U5 607 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 TUBA1AQ71U36 451 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 AAED1Q7RTV5 226 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 MYPOPQ86VE0 399 aaPredicted RBP10.8□□□□□ -0.68
TPM3-204ENST00000323144 MSRB3Q8IXL7 192 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 ZNF440Q8IYI8 595 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 FBXL14Q8N1E6 418 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 C17orf78Q8N4C9 275 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 MUS81Q96NY9 551 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 NAA11Q9BSU3 229 aaPredicted RBP10.8□□□□□ -0.68
TPM3-204ENST00000323144 PTDSS2Q9BVG9 487 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 GRIP2Q9C0E4 1043 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 PAIP1Q9H074 479 aaKnown RBP10.8□□□□□ -0.68
TPM3-204ENST00000323144 NELFAQ9H3P2 528 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 MTHFD2LQ9H903 347 aaPredicted RBP10.8□□□□□ -0.68
TPM3-204ENST00000323144 MGAT4BQ9UQ53 548 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 ATP23Q9Y6H3 246 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 ABCA1O95477 2261 aa10.8□□□□□ -0.68
TPM3-204ENST00000323144 MXRA5Q9NR99 2828 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 IGHV1-18A0A0C4DH31 117 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 FTCDNL1E5RQL4 147 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 H7C417 338 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 KLF11O14901 512 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 NPIPB7O75200 414 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 ZCCHC18P0CG32 403 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 PNMTP11086 282 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 NCF2P19878 526 aaPredicted RBP10.79□□□□□ -0.68
TPM3-204ENST00000323144 CXCR1P25024 350 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 HTR2AP28223 471 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 MPGP29372 298 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 POLR2JP52435 117 aaKnown RBP10.79□□□□□ -0.68
TPM3-204ENST00000323144 GSTA3Q16772 222 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 C1orf140Q5VVS0 124 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 PRAMEF8Q5VWM4 474 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 PRAMEF7Q5VXH5 474 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 WBP2NLQ6ICG8 309 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 OR7E24Q6IFN5 339 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 KLHL24Q6TFL4 600 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 MSANTD1Q6ZTZ1 278 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 CXXC5Q7LFL8 322 aaKnown RBP10.79□□□□□ -0.68
TPM3-204ENST00000323144 SSX8Q7RTT4 187 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 GTF2H4Q92759 462 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 PMM1Q92871 262 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 ITCHQ96J02 903 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 RADILQ96JH8 1075 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 SPATA9Q9BWV2 254 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 YAE1D1Q9NRH1 226 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 NKIRAS1Q9NYS0 192 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 SLC25A37Q9NYZ2 338 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 CALML5Q9NZT1 146 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 MOKQ9UQ07 419 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 USH1CQ9Y6N9 552 aa10.79□□□□□ -0.68
TPM3-204ENST00000323144 HEATR1Q9H583 2144 aaKnown RBP10.79□□□□□ -0.68
TPM3-204ENST00000323144 FAM234BA2RU67 622 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 A8MVM7 634 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 SLCO1B7G3V0H7 640 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 NR5A2O00482 541 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 UBDO15205 165 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 UPK3AO75631 287 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 AHSA1O95433 338 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 TP53P04637 393 aaPredicted RBP10.78□□□□□ -0.68
TPM3-204ENST00000323144 FKBP2P26885 142 aaKnown RBP10.78□□□□□ -0.68
TPM3-204ENST00000323144 RPS5P46782 204 aaKnown RBP10.78□□□□□ -0.68
TPM3-204ENST00000323144 EGR4Q05215 589 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 TBRG1Q3YBR2 411 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 C6orf52Q5T4I8 152 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 ZNF544Q6NX49 715 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 NIPAL3Q6P499 406 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 CLEC2AQ6UVW9 174 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 CROCCP2Q86T23 111 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 MIER2Q8N344 545 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms