RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 OR2A1Q8NGT9 310 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 OR4K13Q8NH42 304 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 DOK4Q8TEW6 326 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 ARRDC3Q96B67 414 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 MS4A4EQ96PG1 132 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 TNFRSF13CQ96RJ3 184 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 CNN2Q99439 309 aaKnown RBP16.46■□□□□ 0.23
PRKCB-202ENST00000321728 SCAMP1O15126 338 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 SULT1B1O43704 296 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 HPP00738 406 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 ART1P52961 327 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 KRT33BQ14525 404 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 TCEA2Q15560 299 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 ZIC1Q15915 447 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 NDUFAF6Q330K2 333 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 METRNLQ641Q3 311 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 TNFAIP8L1Q8WVP5 186 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 MFFQ9GZY8 342 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 V9GY05 133 aa16.46■□□□□ 0.23
PRKCB-202ENST00000321728 PSMD9O00233 223 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 OR2T7P0C7T2 308 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 AMZ1Q400G9 498 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 TCEAL5Q5H9L2 206 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 DCAF12L2Q5VW00 463 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 PWWP2BQ6NUJ5 590 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 SLC35F2Q8IXU6 374 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 SYS1Q8N2H4 156 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 PXT1Q8NFP0 134 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 OR2T27Q8NH04 317 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 NARS2Q96I59 477 aaKnown RBP16.45■□□□□ 0.22
PRKCB-202ENST00000321728 MRPS30Q9NP92 439 aaKnown RBP16.45■□□□□ 0.22
PRKCB-202ENST00000321728 MEPEQ9NQ76 525 aaPredicted RBP16.45■□□□□ 0.22
PRKCB-202ENST00000321728 OR5V1Q9UGF6 321 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 ATPIF1Q9UII2 106 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 MRTO4Q9UKD2 239 aaKnown RBP16.45■□□□□ 0.22
PRKCB-202ENST00000321728 PRNPP04156 253 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 FNTBP49356 437 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 AKR1D1P51857 326 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 FLI1Q01543 452 aaPredicted RBP16.45■□□□□ 0.22
PRKCB-202ENST00000321728 DPTQ07507 201 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 DUSP8Q13202 625 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 PAQR7Q86WK9 346 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 SFTPA1Q8IWL2 248 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 ATOH1Q92858 354 aaPredicted RBP16.45■□□□□ 0.22
PRKCB-202ENST00000321728 SDF2Q99470 211 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 UTP23Q9BRU9 249 aaKnown RBP16.45■□□□□ 0.22
PRKCB-202ENST00000321728 DOCK9Q9BZ29 2069 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 COL4A6Q14031 1691 aa16.45■□□□□ 0.22
PRKCB-202ENST00000321728 TBC1D3KA0A087X1G2 549 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 TBC1D3BA6NDS4 549 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 TBC1D3FA6NER0 549 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-202ENST00000321728 ADH7P40394 386 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 TAS2R20P59543 309 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 MRPS10P82664 201 aaKnown RBP16.44■□□□□ 0.22
PRKCB-202ENST00000321728 SORDQ00796 357 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 IL10RAQ13651 578 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 ARHGAP11BQ3KRB8 267 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 TBC1D3GQ6DHY5 549 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 OTUB2Q96DC9 234 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 A0A1B0GW55 424 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 IDSB3KWA1 339 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 PEX12O00623 359 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 LATO43561 262 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 AGR2O95994 175 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 DUX4L2P0CJ85 424 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 DUX4L3P0CJ86 424 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 DUX4L4P0CJ87 422 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 DUX4L5P0CJ88 424 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 DUX4L6P0CJ89 424 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 DUX4L7P0CJ90 424 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 BTN3A2P78410 334 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 PCGF3Q3KNV8 242 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 NRROSQ86YC3 692 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 OR4N5Q8IXE1 308 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 OR2AK2Q8NG84 335 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 OR10K1Q8NGX5 313 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 LGR4Q9BXB1 951 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 TAS2R3Q9NYW6 316 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-202ENST00000321728 DUX4Q9UBX2 424 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 PLCL2Q9UPR0 1127 aa16.44■□□□□ 0.22
PRKCB-202ENST00000321728 OR6C74A6NCV1 312 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 PRAMEF2O60811 474 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 PTP4A3O75365 173 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 AQP8O94778 261 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 LYPD3O95274 346 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 PCCBP05166 539 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 RAB40ALP0C0E4 278 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 ADRB3P13945 408 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 MC2RQ01718 297 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 RBMS2Q15434 407 aaKnown RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 CSRP2Q16527 193 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 FAM74A1Q5RGS3 127 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 ARHGAP11AQ6P4F7 1023 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 LRRN1Q6UXK5 716 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 UNQ9370/PRO34162Q6UXP9 181 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 MUC20Q8N307 709 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 RAB40AQ8WXH6 277 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 FKRPQ9H9S5 495 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 GMEB2Q9UKD1 530 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms