RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 NARSO43776 548 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SIX6O95475 246 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 GIPP09681 153 aaPredicted RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 RNH1P13489 461 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ARHGAP11BQ3KRB8 267 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 RNASE10Q5GAN6 216 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 TMEM215Q68D42 235 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 HEPHL1Q6MZM0 1159 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 TSSK4Q6SA08 328 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 GALNTL5Q7Z4T8 443 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF547Q8IVP9 402 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 HAVCR2Q8TDQ0 301 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 TTC9Q92623 222 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 HHIPQ96QV1 700 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ANKRD36A6QL64 1941 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 PRRT4C9JH25 899 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 KHNYNO15037 678 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 RAD1O60671 282 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 PRAMEF2O60811 474 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 CLUP10909 449 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF35P13682 527 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SDHBP21912 280 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 HTR2AP28223 471 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 DUSP8Q13202 625 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 KIR2DS3Q14952 304 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ST3GAL2Q16842 350 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 CDNFQ49AH0 187 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SMUG1Q53HV7 270 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 NUP54Q7Z3B4 507 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 PRSS58Q8IYP2 241 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF101Q8IZC7 436 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 DUSP19Q8WTR2 217 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 PMEPA1Q969W9 287 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 SMIM19Q96E16 107 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 GPR174Q9BXC1 333 aa11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 MRPS18AQ9NVS2 196 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-202ENST00000321117 TSPAN11A1L157 253 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 HOXB2P14652 356 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 ATF1P18846 271 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 PBX2P40425 430 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 OR3A2P47893 321 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 AIMP2Q13155 320 aaKnown RBP11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 ARFRP1Q13795 201 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 CDK5R1Q15078 307 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 IQCF2Q8IXL9 164 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF440Q8IYI8 595 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 GCDHQ92947 438 aaPredicted RBP11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 ALG12Q9BV10 488 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 CERS4Q9HA82 394 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 ZNF337Q9Y3M9 751 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 IFNGR1P15260 489 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 RAD52P43351 418 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 ERVFC1P60507 584 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 RUNX3Q13761 415 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 Q499Y3 187 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 EIF5AL1Q6IS14 154 aaKnown RBP11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 SPHK1Q9NYA1 384 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 PRODH2Q9UF12 536 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 FBXL2Q9UKC9 423 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 PLEKHM1Q9Y4G2 1056 aa11.77□□□□□ -0.52
DNMT3A-202ENST00000321117 NTN1O95631 604 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 MAKP20794 623 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 NLRC3Q7RTR2 1065 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 TMEM185AQ8NFB2 350 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 SCARB1Q8WTV0 552 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 DERL3Q96Q80 235 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 OR8D2Q9GZM6 311 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 KIAA0100Q14667 2235 aaKnown RBP11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 PATJQ8NI35 1801 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 MEIKINA0A087WXM9 373 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 HCRTR2O43614 444 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 PLPP2O43688 288 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 SELENOFO60613 162 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 RDH16O75452 317 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 CXCL3P19876 107 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 PRSS53Q2L4Q9 553 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 ST8SIA4Q92187 359 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 NRTNQ99748 197 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 SYT4Q9H2B2 425 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 ACTR10Q9NZ32 417 aa11.77□□□□□ -0.53
DNMT3A-202ENST00000321117 SDC3O75056 442 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 PVRP15151 417 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 FXYD6P3P58550 94 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 SEC61A1P61619 476 aaKnown RBP11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 SCRN3Q0VDG4 424 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 NKPD1Q17RQ9 610 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 HYAL4Q2M3T9 481 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 GXYLT1Q4G148 440 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 ARHGAP40Q5TG30 622 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 TMEM91Q6ZNR0 172 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 TMEM106AQ96A25 262 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 HAVCR1Q96D42 359 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 MRGPRX3Q96LB0 322 aa11.76□□□□□ -0.53
DNMT3A-202ENST00000321117 WFDC6Q9BQY6 131 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms